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term4_saliva_scaffold_1_prodigal-single.1__X__X__00153
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00153
Identity
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 92-216
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.65 | 29.0 | 3.17e-01 | 82.4% | 48.1% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.57 | 25.0 | 3.17e-01 | 92.0% | 68.5% |
| 3bdlA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 42.0 | 3.91e-01 | 83.2% | 68.2% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 33.0 | 3.95e-01 | 77.6% | 92.9% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.74e-01 | 77.6% | 87.8% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 37.0 | 3.55e-01 | 76.0% | 68.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4334534 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.61 | 37.0 | 4.27e-01 | 70.4% | 87.1% |
| 3615541 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 35.0 | 3.52e-01 | 92.0% | 56.8% |
| 5025384 | 304.165.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › Ta1207 | 0.59 | 44.0 | 4.10e-01 | 88.8% | 63.4% |
| 3594431 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 31.0 | 3.33e-01 | 88.0% | 58.2% |
| 3631282 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.54 | 42.0 | 3.78e-01 | 83.2% | 93.3% |
| 3081033 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.53 | 43.0 | 4.34e-01 | 89.6% | 94.5% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.53 | 28.0 | 3.03e-01 | 88.0% | 58.1% |
| 4426056 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.53 | 44.0 | 4.10e-01 | 90.4% | 87.7% |
| 4057630 | 220.1.1.188 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BUD3_C | 0.53 | 43.0 | 4.02e-01 | 89.6% | 95.6% |
| 3220217 | 220.1.1.159 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP | 0.52 | 39.0 | 3.61e-01 | 78.4% | 94.5% |
| 4024322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 27.0 | 3.37e-01 | 78.4% | 82.7% |
| 5052337 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.51 | 41.0 | 3.96e-01 | 88.8% | 78.6% |
| 3734891 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 41.0 | 3.92e-01 | 89.6% | 98.0% |
| 4026146 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 24.0 | 2.90e-01 | 88.0% | 67.9% |
D2
medium
residues 18-69