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term4_saliva_scaffold_1_prodigal-single.1__X__X__00164
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00164
Identity
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-136
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 52.0 | 4.27e-01 | 100.0% | 40.7% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 31.0 | 3.67e-01 | 70.2% | 66.1% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 38.0 | 4.27e-01 | 88.3% | 77.5% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 37.0 | 4.14e-01 | 87.2% | 78.3% |
| 4hkqA04 | 3.10.20.370 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 42.0 | 4.61e-01 | 100.0% | 90.8% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 34.0 | 3.84e-01 | 88.3% | 79.4% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.53 | 46.0 | 3.89e-01 | 100.0% | 89.6% |
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 37.0 | 3.18e-01 | 89.4% | 46.2% |
| 2i0kA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.51 | 42.0 | 3.11e-01 | 92.6% | 82.7% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.50 | 41.0 | 3.08e-01 | 90.4% | 34.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3940510 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.60 | 44.0 | 4.67e-01 | 100.0% | 90.0% |
| 3933646 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.59 | 46.0 | 4.52e-01 | 100.0% | 78.0% |
| 3615435 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 48.0 | 3.70e-01 | 100.0% | 43.8% |
| 3680457 | 223.1.1.28 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N | 0.54 | 39.0 | 3.08e-01 | 76.6% | 88.3% |
| 3669098 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.53 | 43.0 | 3.21e-01 | 90.4% | 77.7% |
| 4014561 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.51 | 39.0 | 3.66e-01 | 81.9% | 92.2% |
| 3591181 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.51 | 39.0 | 3.04e-01 | 100.0% | 35.1% |
| 3956463 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.50 | 43.0 | 3.20e-01 | 95.7% | 97.3% |
| 3552874 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 40.0 | 2.70e-01 | 89.4% | 51.9% |