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term4_saliva_scaffold_1_prodigal-single.1__X__X__00281
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00281
Identity
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-233
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.58 | 25.0 | 3.21e-01 | 72.9% | 66.3% |
| 3zh5A00 | 2.40.128.710 | Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E | 0.58 | 33.0 | 3.71e-01 | 80.0% | 70.5% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 27.0 | 3.57e-01 | 82.4% | 83.3% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 27.0 | 3.45e-01 | 97.1% | 78.0% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 26.0 | 3.01e-01 | 82.9% | 60.5% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.53 | 31.0 | 3.77e-01 | 82.9% | 86.1% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 24.0 | 3.28e-01 | 76.5% | 81.8% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 4.40e-01 | 86.5% | 95.9% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 29.0 | 3.23e-01 | 82.9% | 69.2% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.50 | 34.0 | 3.82e-01 | 78.8% | 90.6% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 33.0 | 3.73e-01 | 77.1% | 89.3% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.50 | 38.0 | 4.04e-01 | 92.4% | 89.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042182 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.67 | 35.0 | 4.45e-01 | 94.7% | 85.0% |
| 5057039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 27.0 | 3.93e-01 | 81.8% | 82.1% |
| 5024957 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.65 | 30.0 | 4.26e-01 | 84.1% | 92.4% |
| 3515333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 28.0 | 3.65e-01 | 82.9% | 83.3% |
| 3764790 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 30.0 | 3.81e-01 | 86.5% | 88.4% |
| 3773175 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.55 | 34.0 | 3.34e-01 | 83.5% | 55.7% |
| 3936676 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 26.0 | 3.30e-01 | 80.6% | 76.8% |
| 3186853 | 881.1.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 | 0.54 | 36.0 | 3.49e-01 | 100.0% | 59.5% |
| 3926039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 31.0 | 3.89e-01 | 72.4% | 98.0% |
| 4666593 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.52 | 42.0 | 4.34e-01 | 85.3% | 97.5% |
| 3576101 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.51 | 38.0 | 4.04e-01 | 83.5% | 88.0% |
| 4103146 | 241.1.1.17 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › RM5_Med14 | 0.50 | 32.0 | 3.84e-01 | 81.8% | 100.0% |
| 3925421 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 29.0 | 3.68e-01 | 73.5% | 96.0% |
| 3934735 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 29.0 | 3.64e-01 | 71.8% | 95.0% |
| 3474589 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 32.0 | 3.27e-01 | 97.6% | 63.0% |
| 3646327 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 35.0 | 3.61e-01 | 85.9% | 75.0% |