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term4_saliva_scaffold_5_prodigal-single.1__X__X__00018

Bact-Vir

term4_saliva_scaffold_5_prodigal-single.1__X__X__00018

Identity

Kingdom:
phage

Quality

70.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-97
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tvzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 38.0 3.39e-01 81.9% 91.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950325 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.50 41.0 4.33e-01 100.0% 100.0%
D2 medium residues 156-316
PDB
D3 medium residues 324-470
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xctB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 32.0 3.59e-01 81.0% 83.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3242632 5001.1.1.106 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str 0.53 36.0 2.81e-01 70.7% 84.9%
D4 medium residues 635-747
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 31.0 3.86e-01 85.0% 76.8%
1wjqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 33.0 3.92e-01 83.2% 74.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 30.0 4.03e-01 82.3% 89.8%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 32.0 4.24e-01 85.0% 93.5%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 30.0 3.95e-01 90.3% 84.4%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 31.0 4.01e-01 82.3% 87.3%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 31.0 3.53e-01 83.2% 68.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 29.0 3.65e-01 83.2% 79.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 30.0 4.03e-01 81.4% 98.2%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 38.0 3.67e-01 100.0% 60.3%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 36.0 4.04e-01 92.9% 89.5%
3ptaA03 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 37.0 3.24e-01 85.8% 47.7%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 34.0 3.36e-01 93.8% 61.3%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 30.0 3.64e-01 83.2% 97.0%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 33.0 3.17e-01 93.8% 56.0%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407849 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 32.0 3.72e-01 87.6% 65.9%
4984882 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.63 32.0 3.96e-01 82.3% 78.6%
3519126 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 32.0 3.73e-01 94.7% 68.8%
3415020 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.63 31.0 3.65e-01 93.8% 67.5%
3245086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 40.0 4.34e-01 92.9% 76.8%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.62 30.0 3.97e-01 85.8% 85.0%
1394554 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 32.0 4.18e-01 85.0% 90.6%
3519125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 29.0 4.15e-01 81.4% 100.0%
4112177 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 32.0 4.12e-01 85.8% 89.2%
4268386 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 32.0 4.04e-01 86.7% 84.3%
2127246 4.8.1.4 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT 0.60 33.0 4.16e-01 87.6% 88.4%
3580609 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 29.0 3.79e-01 81.4% 81.2%
3620554 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 32.0 3.47e-01 82.3% 60.0%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 32.0 4.23e-01 85.0% 96.7%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 32.0 4.25e-01 85.8% 98.3%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.59 32.0 3.19e-01 87.6% 50.4%
4002498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 31.0 3.36e-01 85.0% 58.9%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.59 30.0 3.19e-01 85.8% 53.3%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 30.0 3.13e-01 88.5% 54.3%
4177510 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.57 34.0 3.34e-01 93.8% 52.8%
3833012 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.57 34.0 3.83e-01 85.8% 78.8%
4932609 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 30.0 3.78e-01 85.0% 89.2%
5038340 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 32.0 3.78e-01 83.2% 82.7%
3866505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 28.0 3.73e-01 83.2% 100.0%
3938261 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.54 33.0 2.97e-01 93.8% 44.7%
4994549 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.53 34.0 3.03e-01 93.8% 44.2%
4601878 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.53 34.0 3.27e-01 93.8% 56.2%
5028926 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.53 34.0 3.19e-01 93.8% 52.1%
5054535 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.53 34.0 3.48e-01 93.8% 66.4%
4180317 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.53 34.0 3.31e-01 93.8% 58.4%
4937910 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.53 34.0 3.26e-01 93.8% 56.2%
4279051 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.53 34.0 3.52e-01 93.8% 69.5%
4417349 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.52 34.0 3.51e-01 93.8% 69.5%
3340031 4.1.1.295 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.52 34.0 3.21e-01 93.8% 54.1%
5037204 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.52 33.0 3.33e-01 93.8% 60.8%
2855766 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.52 34.0 3.21e-01 93.8% 55.6%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.52 27.0 3.35e-01 83.2% 84.6%
4263339 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.52 30.0 3.50e-01 83.2% 81.2%
4071168 4.1.1.95 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.52 33.0 3.34e-01 93.8% 63.5%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.51 28.0 3.36e-01 83.2% 80.0%
4026161 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.51 29.0 2.88e-01 83.2% 51.2%