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term4_saliva_scaffold_5_prodigal-single.1__X__X__00028

Bact-Vir

term4_saliva_scaffold_5_prodigal-single.1__X__X__00028

Identity

Kingdom:
phage

Quality

46.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 646-787
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 33.0 4.33e-01 91.5% 90.9%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 34.0 4.22e-01 94.4% 90.2%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 31.0 4.02e-01 92.3% 100.0%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.57 24.0 3.10e-01 78.2% 65.9%
1r71A02 6.10.250.140 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 21.0 3.08e-01 83.8% 75.9%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 28.0 3.50e-01 93.7% 90.8%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 27.0 3.52e-01 98.6% 91.9%
4ghnA01 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.50 34.0 3.75e-01 79.6% 87.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958970 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.63 22.0 2.98e-01 97.9% 56.2%
3965598 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 31.0 4.12e-01 93.0% 100.0%
3868088 110.1.1.2 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD 0.59 36.0 4.32e-01 93.0% 94.4%
3734934 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.59 38.0 4.40e-01 90.8% 95.8%
4990327 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 25.0 3.14e-01 82.4% 70.6%
4990226 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.53 38.0 3.28e-01 73.2% 57.0%
D2 medium residues 26-92
PDB
D3 medium residues 231-333
PDB
D4 medium residues 362-441
PDB