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term4_saliva_scaffold_5_prodigal-single.1__X__X__00051

Bact-Vir

term4_saliva_scaffold_5_prodigal-single.1__X__X__00051

Identity

Kingdom:
phage

Quality

61.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 155-289
PDB
Domain cluster: rep: term4_saliva_scaffold_5_prodigal-single.1__X__X__00049__D13-130
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 35.0 4.50e-01 97.8% 94.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 25.0 3.45e-01 96.3% 79.0%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 33.0 3.33e-01 100.0% 62.4%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 22.0 2.99e-01 96.3% 75.8%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.51 29.0 3.68e-01 96.3% 92.7%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 25.0 3.34e-01 96.3% 100.0%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 23.0 3.17e-01 94.8% 100.0%
3ljyA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 30.0 2.53e-01 100.0% 32.6%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3599920 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 35.0 4.31e-01 98.5% 89.4%
3717380 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.59 35.0 4.34e-01 98.5% 97.5%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 25.0 3.54e-01 77.8% 81.5%
4984379 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.55 31.0 4.05e-01 94.1% 100.0%
4998126 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.55 33.0 4.03e-01 93.3% 94.1%
4968816 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.54 34.0 3.98e-01 98.5% 89.5%
4139699 2.1.1.48 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.53 26.0 3.54e-01 89.6% 98.3%
3197575 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.52 30.0 3.55e-01 91.1% 83.3%
3959123 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.52 34.0 3.82e-01 92.6% 86.7%
5074506 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 32.0 3.73e-01 92.6% 89.4%
5024446 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 32.0 3.79e-01 91.9% 92.2%
5010568 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 32.0 3.71e-01 91.9% 88.4%
5065719 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.51 32.0 3.72e-01 91.9% 92.2%
5019744 2.1.1.384 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30889 0.51 32.0 3.79e-01 97.0% 91.6%
3529340 922.1.1.0 ↗ few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat 0.50 26.0 3.42e-01 100.0% 94.3%
D2 medium residues 4-141
PDB