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term4_saliva_scaffold_5_prodigal-single.1__X__X__00056
Bact-Virterm4_saliva_scaffold_5_prodigal-single.1__X__X__00056
Identity
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-51
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.63 | 50.0 | 3.57e-01 | 88.0% | 31.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.61 | 49.0 | 4.02e-01 | 88.0% | 54.4% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 49.0 | 3.15e-01 | 88.0% | 19.9% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 47.0 | 4.52e-01 | 98.0% | 75.0% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.60 | 50.0 | 5.09e-01 | 94.0% | 93.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 4.31e-01 | 88.0% | 83.1% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 4.68e-01 | 90.0% | 81.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 50.0 | 4.62e-01 | 94.0% | 96.8% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 47.0 | 3.33e-01 | 96.0% | 30.6% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 46.0 | 3.12e-01 | 88.0% | 25.1% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 45.0 | 4.22e-01 | 96.0% | 78.7% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 41.0 | 2.66e-01 | 92.0% | 65.7% |
| 3hl1A02 | 6.10.140.1530 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 43.0 | 4.00e-01 | 94.0% | 92.3% |
| 3pr6A00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 46.0 | 3.30e-01 | 100.0% | 89.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.65 | 44.0 | 4.62e-01 | 84.0% | 77.8% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.63 | 51.0 | 5.11e-01 | 88.0% | 88.2% |
| 3285567 | 5069.1.1.17 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF6529 | 0.61 | 48.0 | 3.33e-01 | 88.0% | 27.6% |
| 3330916 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.61 | 49.0 | 4.80e-01 | 88.0% | 81.8% |
| 3554931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 48.0 | 4.70e-01 | 88.0% | 90.7% |
| 3796175 | 192.15.1.99 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › PF31025 | 0.59 | 45.0 | 4.50e-01 | 88.0% | 86.8% |
| 3844040 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.58 | 43.0 | 4.07e-01 | 88.0% | 66.2% |
| 3289263 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.57 | 46.0 | 4.12e-01 | 90.0% | 75.7% |
| 4942548 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 3.40e-01 | 100.0% | 54.7% |
| 3583169 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 41.0 | 3.66e-01 | 88.0% | 57.5% |
| 4946274 | 152.1.1.0 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 | 0.52 | 36.0 | 3.08e-01 | 72.0% | 65.0% |