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term4_saliva_scaffold_5_prodigal-single.1__X__X__00064
Bact-Virterm4_saliva_scaffold_5_prodigal-single.1__X__X__00064
Identity
- Kingdom:
- phage
Quality
63.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-167_318-376
Domain cluster:
rep: BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00163__D17-175
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p0nA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.54 | 25.0 | 2.88e-01 | 92.5% | 55.3% |
| 4wz9A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.54 | 48.0 | 4.51e-01 | 99.5% | 79.5% |
| 1vu2201 | 1.20.58.1070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 29.0 | 3.27e-01 | 100.0% | 67.6% |
| 1g2nA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 37.0 | 3.52e-01 | 70.4% | 93.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287565 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.80 | 74.0 | 7.49e-01 | 96.7% | 100.0% |
| 4930641 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.78 | 60.0 | 6.74e-01 | 97.7% | 99.4% |
| 4959353 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.75 | 63.0 | 6.79e-01 | 96.2% | 100.0% |
| 5041958 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.75 | 67.0 | 6.98e-01 | 98.1% | 100.0% |
| 4223692 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.73 | 57.0 | 6.37e-01 | 97.2% | 100.0% |
| 3618514 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.56 | 47.0 | 4.52e-01 | 99.5% | 77.5% |
| 3244245 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 46.0 | 4.41e-01 | 99.5% | 75.8% |
| 3923311 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.55 | 46.0 | 4.46e-01 | 99.1% | 78.8% |
| 3239825 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 48.0 | 4.62e-01 | 100.0% | 85.0% |
| 4948072 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 47.0 | 4.83e-01 | 95.3% | 99.0% |
| 4978812 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.52 | 48.0 | 4.64e-01 | 100.0% | 89.8% |
| 5000286 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.50 | 28.0 | 3.37e-01 | 84.5% | 80.0% |
D2
high
residues 380-397_432-583
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00112__D438-482_516-700
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09967.16 best | DUF2201 | 35.1 | 1.90e-08 | 60.6% | 59.4% |