←Back to structures
term6_saliva_scaffold_0_prodigal-single.1__X__X__00147
Bact-Virterm6_saliva_scaffold_0_prodigal-single.1__X__X__00147
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 453-601
Domain cluster:
rep: term4_saliva_scaffold_5_prodigal-single.1__X__X__00109__D9-139
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01420.26 best | Methylase_S | 25.5 | 2.00e-05 | 82.5% | 64.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ydxA03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.83 | 67.0 | 6.85e-01 | 91.3% | 86.8% |
| 1ydxA01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.81 | 66.0 | 7.08e-01 | 87.2% | 97.7% |
| 1yf2A03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.81 | 67.0 | 6.76e-01 | 85.9% | 98.6% |
| 7vruC01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.76 | 71.0 | 6.77e-01 | 100.0% | 93.1% |
| 3okgA02 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.75 | 67.0 | 6.20e-01 | 100.0% | 76.3% |
| 7btoI02 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.75 | 69.0 | 6.52e-01 | 100.0% | 93.1% |
| 7btoI01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.74 | 69.0 | 6.85e-01 | 100.0% | 96.8% |
| 1yf2A01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.72 | 64.0 | 6.11e-01 | 94.0% | 87.7% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 24.0 | 3.07e-01 | 91.3% | 72.6% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4157881 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.94 | 88.0 | 8.38e-01 | 100.0% | 85.3% |
| 4279553 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.92 | 87.0 | 8.52e-01 | 100.0% | 91.3% |
| 3839864 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.89 | 85.0 | 6.02e-01 | 100.0% | 40.0% |
| 3964449 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.87 | 78.0 | 8.09e-01 | 100.0% | 99.3% |
| 4458448 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.85 | 77.0 | 5.72e-01 | 100.0% | 42.4% |
| 4093841 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.85 | 76.0 | 6.56e-01 | 100.0% | 63.9% |
| 5018564 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.84 | 72.0 | 5.09e-01 | 100.0% | 32.4% |
| 3964430 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.84 | 80.0 | 7.77e-01 | 100.0% | 96.9% |
| 5002485 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.83 | 76.0 | 6.88e-01 | 100.0% | 74.7% |
| 4174469 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 74.0 | 6.41e-01 | 100.0% | 65.1% |
| 3949110 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 74.0 | 5.31e-01 | 100.0% | 36.8% |
| 3955598 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 73.0 | 7.04e-01 | 100.0% | 84.2% |
| 4266827 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 73.0 | 5.28e-01 | 100.0% | 37.3% |
| 5021587 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.81 | 70.0 | 6.83e-01 | 100.0% | 84.4% |
| 5004387 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 70.0 | 6.51e-01 | 100.0% | 75.6% |
| 3838563 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 73.0 | 5.12e-01 | 100.0% | 34.2% |
| 3163610 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 73.0 | 5.36e-01 | 100.0% | 40.3% |
| 7667 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 73.0 | 6.78e-01 | 100.0% | 79.6% |
| 4031555 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.79 | 75.0 | 6.63e-01 | 100.0% | 79.0% |
| 3839878 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.79 | 73.0 | 6.31e-01 | 100.0% | 67.0% |
| 4950209 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.79 | 74.0 | 6.97e-01 | 100.0% | 90.3% |
| 5079882 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 72.0 | 5.18e-01 | 100.0% | 37.9% |
| 3964644 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 72.0 | 6.58e-01 | 100.0% | 76.8% |
| 3959398 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.78 | 68.0 | 6.60e-01 | 92.6% | 90.3% |
| 4937813 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 73.0 | 5.19e-01 | 100.0% | 39.0% |
| 4315663 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 72.0 | 5.22e-01 | 100.0% | 42.0% |
| 4931721 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 72.0 | 5.28e-01 | 100.0% | 41.6% |
| 5017975 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 73.0 | 5.31e-01 | 100.0% | 41.3% |
| 3604650 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 72.0 | 6.36e-01 | 100.0% | 77.1% |
| 3978546 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 73.0 | 5.02e-01 | 100.0% | 35.6% |
| 4927786 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 72.0 | 6.22e-01 | 100.0% | 70.9% |
| 4967988 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 72.0 | 6.27e-01 | 100.0% | 69.8% |
| 5059847 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 70.0 | 6.85e-01 | 98.7% | 91.2% |
| 86552 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.77 | 71.0 | 6.19e-01 | 100.0% | 73.2% |
| 4598582 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.77 | 71.0 | 5.15e-01 | 100.0% | 42.1% |
| 5039257 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 72.0 | 6.36e-01 | 100.0% | 77.6% |
| 3603562 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 71.0 | 6.27e-01 | 100.0% | 76.7% |
| 5019246 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 71.0 | 6.55e-01 | 100.0% | 81.6% |
| 4967679 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 71.0 | 6.05e-01 | 100.0% | 68.7% |
| 4967678 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 71.0 | 4.98e-01 | 100.0% | 36.3% |
| 7668 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 71.0 | 6.13e-01 | 100.0% | 73.6% |
| 4964247 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 70.0 | 5.13e-01 | 100.0% | 39.5% |
| 5002484 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 70.0 | 6.20e-01 | 100.0% | 75.7% |
| 3838956 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 66.0 | 6.59e-01 | 100.0% | 91.3% |
| 4930115 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 70.0 | 6.27e-01 | 100.0% | 81.0% |
| 4945553 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 70.0 | 5.87e-01 | 100.0% | 61.3% |
| 3386282 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 69.0 | 5.78e-01 | 100.0% | 60.4% |
| 5032021 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 71.0 | 6.21e-01 | 100.0% | 76.2% |
| 5032020 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 69.0 | 6.17e-01 | 100.0% | 73.0% |
| 5019092 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 70.0 | 6.47e-01 | 100.0% | 80.5% |
| 3947931 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.75 | 61.0 | 6.17e-01 | 85.2% | 91.3% |
| 4930116 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 69.0 | 6.07e-01 | 100.0% | 74.4% |
| 4936611 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 70.0 | 4.96e-01 | 100.0% | 37.1% |
| 2774216 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 69.0 | 6.39e-01 | 100.0% | 80.1% |
| 3988205 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 69.0 | 6.20e-01 | 100.0% | 74.0% |
| 3602866 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 69.0 | 4.92e-01 | 100.0% | 39.0% |
| 5019091 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 69.0 | 6.16e-01 | 100.0% | 77.1% |
| 1145906 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.74 | 69.0 | 6.15e-01 | 100.0% | 78.6% |
| 5046633 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.74 | 69.0 | 5.78e-01 | 100.0% | 86.9% |
| 5049453 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.73 | 68.0 | 5.54e-01 | 100.0% | 79.6% |
| 5071301 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.73 | 69.0 | 6.49e-01 | 100.0% | 92.0% |
| 4954642 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.73 | 68.0 | 5.60e-01 | 100.0% | 73.7% |
| 3604092 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.73 | 68.0 | 5.63e-01 | 100.0% | 87.6% |
| 4297667 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 67.0 | 5.64e-01 | 100.0% | 78.0% |
| 5002491 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 67.0 | 5.67e-01 | 100.0% | 82.9% |
| 3840068 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 59.0 | 5.50e-01 | 86.6% | 77.8% |
| 4954652 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 67.0 | 5.44e-01 | 100.0% | 69.8% |
| 5002947 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 67.0 | 4.63e-01 | 100.0% | 34.5% |
| 4369183 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 67.0 | 5.50e-01 | 100.0% | 72.5% |
| 5046166 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 66.0 | 5.49e-01 | 100.0% | 82.0% |
| 4950208 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.71 | 67.0 | 6.25e-01 | 100.0% | 85.6% |
| 4930429 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.71 | 67.0 | 5.66e-01 | 100.0% | 69.4% |
| 3975469 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.71 | 66.0 | 5.44e-01 | 100.0% | 73.8% |
| 3964199 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.71 | 66.0 | 6.39e-01 | 100.0% | 90.3% |
| 4954646 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.71 | 66.0 | 5.25e-01 | 100.0% | 66.0% |
| 4656227 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.71 | 65.0 | 5.50e-01 | 100.0% | 86.5% |
| 5038524 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.71 | 66.0 | 5.87e-01 | 100.0% | 73.7% |
| 3005885 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.70 | 65.0 | 6.11e-01 | 100.0% | 84.9% |
| 3386288 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.70 | 66.0 | 5.79e-01 | 100.0% | 77.1% |
| 5028320 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.70 | 65.0 | 4.79e-01 | 100.0% | 43.2% |
| 4032741 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.70 | 65.0 | 5.93e-01 | 100.0% | 77.9% |
| 5076057 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.69 | 64.0 | 5.44e-01 | 100.0% | 72.8% |
| 3604237 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.67 | 62.0 | 5.29e-01 | 100.0% | 86.0% |
| 4065299 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.52 | 22.0 | 2.87e-01 | 77.2% | 69.3% |
D2
medium
residues 1-144
Domain cluster:
rep: term4_saliva_scaffold_5_prodigal-single.1__X__X__00110__D12-136
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h6gA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.67 | 32.0 | 3.44e-01 | 88.9% | 53.2% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.58 | 31.0 | 3.33e-01 | 97.9% | 56.6% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.58 | 34.0 | 3.56e-01 | 96.5% | 62.1% |
| 2hs5A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.58 | 45.0 | 4.57e-01 | 81.9% | 96.4% |
| 1l7vA00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.57 | 52.0 | 4.01e-01 | 100.0% | 84.2% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 37.0 | 3.93e-01 | 88.9% | 75.6% |
| 3e0zA00 | 1.20.58.1400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Domain of unknown function DUF3837 | 0.56 | 40.0 | 4.49e-01 | 86.8% | 99.1% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.56 | 39.0 | 4.07e-01 | 99.3% | 76.7% |
| 3ghyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 31.0 | 3.28e-01 | 98.6% | 59.2% |
| 4gc0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.54 | 43.0 | 3.61e-01 | 85.4% | 81.1% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 41.0 | 4.09e-01 | 97.9% | 77.0% |
| 5iduA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 33.0 | 3.62e-01 | 84.0% | 75.0% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 32.0 | 3.85e-01 | 81.2% | 95.6% |
| 4iu9B01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 41.0 | 3.61e-01 | 86.1% | 87.9% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.51 | 41.0 | 3.00e-01 | 87.5% | 62.7% |
| 3mesA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.50 | 42.0 | 3.36e-01 | 89.6% | 54.4% |
| 6l1kA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.50 | 40.0 | 3.58e-01 | 83.3% | 81.2% |
| 7aqbB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 35.0 | 3.18e-01 | 81.9% | 52.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1550091 | 3962.1.1.1 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit › HsdM_N | 0.68 | 60.0 | 5.54e-01 | 97.2% | 100.0% |
| 5079293 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.60 | 46.0 | 4.95e-01 | 86.8% | 92.8% |
| 4420734 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.57 | 52.0 | 4.08e-01 | 100.0% | 87.4% |
| 3185570 | 3755.4.1.3 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Helo_like_N | 0.57 | 34.0 | 3.17e-01 | 87.5% | 49.1% |
| 3302202 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.56 | 52.0 | 3.91e-01 | 100.0% | 68.2% |
| 3946006 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.56 | 48.0 | 4.13e-01 | 93.1% | 95.2% |
| 3972967 | 5065.1.1.0 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold | 0.56 | 50.0 | 3.84e-01 | 100.0% | 79.9% |
| 3260953 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.56 | 32.0 | 3.46e-01 | 94.4% | 65.6% |
| 4346135 | 3921.1.1.0 ↗ | alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D | 0.55 | 46.0 | 4.26e-01 | 96.5% | 70.6% |
| 4945740 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.55 | 49.0 | 4.47e-01 | 95.8% | 78.9% |
| 3624023 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.55 | 46.0 | 4.81e-01 | 89.6% | 100.0% |
| 4573483 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.55 | 49.0 | 3.81e-01 | 100.0% | 82.7% |
| 4977935 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.54 | 38.0 | 3.20e-01 | 71.5% | 68.2% |
| 5057574 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 44.0 | 4.05e-01 | 87.5% | 99.5% |
| 3289554 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.54 | 33.0 | 3.52e-01 | 85.4% | 70.0% |
| 5060465 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 43.0 | 3.70e-01 | 86.8% | 87.0% |
| 3887441 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 43.0 | 3.81e-01 | 86.8% | 87.6% |
| 3821755 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 44.0 | 4.31e-01 | 89.6% | 82.5% |
| 4940970 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 43.0 | 3.95e-01 | 88.9% | 97.4% |
| 3278832 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.52 | 34.0 | 3.56e-01 | 83.3% | 70.4% |
| 3379819 | 6164.1.1.4 ↗ | alpha bundles › Bestrophin › Bestrophin › Bestrophin › Bestrophin_2 | 0.52 | 47.0 | 3.59e-01 | 100.0% | 63.2% |
| 3598200 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.52 | 46.0 | 3.60e-01 | 97.9% | 71.7% |
| 4092719 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 41.0 | 3.55e-01 | 83.3% | 88.2% |
| 3173949 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 46.0 | 3.54e-01 | 97.9% | 62.7% |
| 4213215 | 150.3.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IL6 | 0.52 | 39.0 | 3.72e-01 | 96.5% | 65.7% |
| 4991543 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.51 | 45.0 | 3.76e-01 | 98.6% | 97.0% |
| 3754435 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 42.0 | 3.55e-01 | 87.5% | 79.6% |
| 5016849 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 46.0 | 3.67e-01 | 99.3% | 91.4% |
| 4352214 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 47.0 | 3.57e-01 | 100.0% | 87.0% |
D3
medium
residues 398-452
Domain cluster:
rep: term1_saliva_scaffold_14_prodigal-single.1__X__X__00222__D56-109