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term6_saliva_scaffold_0_prodigal-single.1__X__X__00257
Bact-Virterm6_saliva_scaffold_0_prodigal-single.1__X__X__00257
Identity
- Kingdom:
- phage
Quality
57.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-107_126-165
Domain cluster:
rep: term4_saliva_scaffold_1_prodigal-single.1__X__X__00098__D29-98_116-131
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.67 | 27.0 | 2.75e-01 | 80.4% | 35.7% |
| 1y0nA00 | 1.10.10.610 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like | 0.59 | 38.0 | 4.34e-01 | 79.4% | 90.1% |
| 3a04A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.52 | 35.0 | 3.31e-01 | 76.3% | 57.8% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.51 | 40.0 | 3.44e-01 | 84.5% | 80.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4129523 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 31.0 | 3.71e-01 | 75.3% | 72.3% |
| 11050 | 4137.1.1.1 ↗ | a+b three layers › YehU-like › YehU-like › YehU-like › UPF0270 | 0.59 | 38.0 | 4.34e-01 | 79.4% | 90.1% |
| 3997877 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.56 | 36.0 | 3.58e-01 | 95.9% | 62.0% |
| 3975095 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.55 | 32.0 | 3.93e-01 | 100.0% | 93.3% |
| 4928332 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.52 | 34.0 | 4.08e-01 | 80.4% | 100.0% |
| 4660335 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.52 | 30.0 | 3.77e-01 | 95.9% | 100.0% |
| 3630540 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.50 | 32.0 | 2.37e-01 | 100.0% | 23.8% |