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term6_stool_scaffold_5_prodigal-single.1__X__X__00025

Bact-Vir

term6_stool_scaffold_5_prodigal-single.1__X__X__00025

Identity

Kingdom:
phage

Quality

77.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-111
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03477.22 best ATP-cone 65.9 5.30e-18 76.8% 96.6%
D2 high residues 175-321
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14890.12 best Intein_splicing 57.5 2.00e-15 95.9% 97.4%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 80.0 8.26e-01 100.0% 95.7%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 77.0 7.96e-01 100.0% 96.4%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 81.0 8.33e-01 100.0% 100.0%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 81.0 7.54e-01 100.0% 98.9%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 80.0 7.35e-01 100.0% 98.9%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 76.0 7.76e-01 100.0% 97.2%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 80.0 7.61e-01 100.0% 98.8%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 80.0 7.55e-01 100.0% 95.9%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 79.0 7.50e-01 100.0% 98.8%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 76.0 7.74e-01 100.0% 97.2%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 79.0 7.67e-01 100.0% 91.9%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 79.0 7.23e-01 100.0% 98.3%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 76.0 7.29e-01 100.0% 98.8%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 76.0 7.23e-01 100.0% 98.8%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 73.0 7.34e-01 100.0% 100.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 25.0 3.53e-01 95.9% 87.1%
2wngA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 26.0 3.21e-01 100.0% 69.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 21.0 3.01e-01 86.4% 73.8%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.52 25.0 3.41e-01 84.4% 95.6%
1c7uA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.51 19.0 2.74e-01 91.8% 73.0%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.93 82.0 8.55e-01 100.0% 98.5%
4993732 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.93 73.0 7.96e-01 100.0% 95.2%
3952464 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.91 81.0 8.21e-01 100.0% 93.1%
4457379 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 80.0 8.05e-01 100.0% 91.7%
4872043 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 8.27e-01 100.0% 95.3%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 85.0 8.08e-01 100.0% 98.2%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 85.0 8.12e-01 100.0% 98.8%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.14e-01 100.0% 96.7%
4930925 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 77.0 7.94e-01 100.0% 97.1%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 8.22e-01 100.0% 97.3%
2553113 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 70.0 7.54e-01 100.0% 96.9%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 83.0 7.92e-01 100.0% 97.0%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.93e-01 97.3% 100.0%
4943231 69.1.1.16 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab 0.86 82.0 7.57e-01 100.0% 96.7%
4152516 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 75.0 7.87e-01 99.3% 99.3%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 75.0 7.67e-01 100.0% 95.0%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 6.46e-01 100.0% 56.0%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 82.0 7.75e-01 100.0% 97.1%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 78.0 7.90e-01 100.0% 96.6%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 82.0 7.93e-01 100.0% 98.8%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 82.0 8.06e-01 100.0% 100.0%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.79e-01 100.0% 98.8%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 7.68e-01 100.0% 98.2%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 7.59e-01 100.0% 97.7%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 82.0 8.01e-01 100.0% 97.4%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 77.0 7.69e-01 100.0% 92.7%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 82.0 6.26e-01 100.0% 52.2%
3604383 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 6.99e-01 100.0% 98.1%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 78.0 7.94e-01 100.0% 97.9%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 81.0 7.89e-01 100.0% 93.8%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 6.88e-01 100.0% 98.7%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 80.0 7.35e-01 100.0% 98.9%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 7.60e-01 100.0% 98.2%
2636473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 76.0 7.67e-01 100.0% 94.5%
5013937 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 81.0 7.74e-01 100.0% 96.4%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 81.0 7.44e-01 100.0% 98.3%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.84 80.0 7.49e-01 100.0% 96.0%
4993454 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 6.70e-01 100.0% 96.6%
4315406 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.40e-01 100.0% 99.4%
4978263 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 81.0 7.70e-01 100.0% 95.2%
2323756 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 7.81e-01 100.0% 99.4%
4594307 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.57e-01 100.0% 98.2%
5078549 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 80.0 7.74e-01 100.0% 96.2%
5024341 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 80.0 7.27e-01 100.0% 96.2%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 80.0 7.96e-01 100.0% 98.7%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.47e-01 100.0% 98.2%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 78.0 7.19e-01 98.6% 100.0%
3603738 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 75.0 7.69e-01 99.3% 98.6%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 78.0 7.72e-01 99.3% 99.4%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 80.0 7.72e-01 100.0% 97.5%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.13e-01 100.0% 96.8%
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 70.0 7.42e-01 98.6% 98.5%
4933756 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 76.0 7.77e-01 100.0% 100.0%
4405940 242.1.1.8 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3, Intein_splicing 0.83 79.0 5.35e-01 100.0% 35.7%
5030847 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 79.0 7.70e-01 100.0% 91.9%
4322985 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.83 72.0 5.21e-01 100.0% 37.2%
4565870 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 79.0 7.74e-01 100.0% 94.2%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 75.0 7.55e-01 100.0% 95.9%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 79.0 7.64e-01 100.0% 97.5%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.16e-01 100.0% 93.5%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.59e-01 100.0% 96.9%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.39e-01 100.0% 94.7%
4586920 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.71e-01 100.0% 98.1%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.35e-01 100.0% 98.8%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.75e-01 100.0% 99.3%
4948016 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 77.0 7.64e-01 98.0% 97.3%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 76.0 7.72e-01 100.0% 98.6%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.44e-01 100.0% 98.2%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 77.0 7.62e-01 100.0% 98.1%
3602222 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.53e-01 99.3% 99.6%
4342207 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 78.0 7.75e-01 100.0% 98.0%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.29e-01 100.0% 96.5%
3257888 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 78.0 7.76e-01 100.0% 98.0%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 6.70e-01 100.0% 95.7%
4127166 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 78.0 7.76e-01 100.0% 98.7%
5032319 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 78.0 7.73e-01 100.0% 98.0%
4996523 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.83e-01 100.0% 97.5%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.26e-01 100.0% 95.3%
3949584 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.66e-01 99.3% 98.7%
4998392 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.36e-01 100.0% 98.2%
4291841 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 77.0 7.33e-01 100.0% 100.0%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 72.0 7.29e-01 93.9% 98.6%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 65.0 6.81e-01 100.0% 94.8%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 74.0 7.28e-01 100.0% 96.8%
2546507 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.77 71.0 7.23e-01 100.0% 99.3%
3234017 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 73.0 6.92e-01 100.0% 88.4%
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.08e-01 100.0% 97.5%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 70.0 7.07e-01 100.0% 97.2%
4993871 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 58.0 6.55e-01 79.6% 100.0%
4941327 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 70.0 7.07e-01 94.6% 97.9%
4180552 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 73.0 6.96e-01 100.0% 98.8%
4940699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.76 72.0 7.10e-01 100.0% 98.7%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.55 27.0 3.37e-01 89.1% 76.5%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.54 28.0 3.36e-01 95.2% 74.7%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.54 28.0 3.46e-01 98.6% 81.1%
D3 medium residues 112-172_916-974
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13597.12 best NRDD 34.1 1.90e-08 52.5% 11.1%
PF13597.12 NRDD 35.3 8.00e-09 45.8% 9.1%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b8bA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.86 73.0 4.61e-01 89.2% 65.7%
2zopA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.66 37.0 3.82e-01 90.8% 57.1%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.63 58.0 3.60e-01 98.3% 56.7%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.62 36.0 3.72e-01 91.7% 59.3%
2q58B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 49.0 3.61e-01 100.0% 70.2%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.54 46.0 4.41e-01 91.7% 87.1%
1m0wA03 1.10.1080.10 Mainly Alpha › Orthogonal Bundle › Glutathione Synthetase; Chain A, domain 3 › Glutathione Synthetase; Chain A, domain 3 0.53 28.0 3.30e-01 82.5% 72.9%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.53 38.0 3.31e-01 75.0% 84.7%
3ayfA01 1.20.210.10 Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain 0.52 45.0 2.94e-01 95.0% 96.6%
2y0nC00 1.10.274.30 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › MRG domain 0.50 40.0 3.68e-01 86.7% 85.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5031517 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.96 81.0 4.96e-01 86.7% 60.7%
5001541 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.92 88.0 5.37e-01 100.0% 61.8%
5079907 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.91 88.0 5.36e-01 100.0% 61.6%
5037353 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.91 87.0 5.35e-01 100.0% 61.0%
3603295 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.91 87.0 5.40e-01 100.0% 62.8%
4961008 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.91 87.0 5.31e-01 100.0% 61.0%
5051505 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.90 72.0 4.66e-01 82.5% 63.0%
4976938 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.90 86.0 5.23e-01 100.0% 60.4%
3978395 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.90 85.0 5.24e-01 100.0% 58.9%
4974476 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.90 86.0 5.19e-01 100.0% 62.2%
3949156 2500.1.1.7 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Gly_radical, NRDD 0.90 85.0 5.23e-01 100.0% 58.9%
5048774 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.89 85.0 5.23e-01 100.0% 62.5%
3100301 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.89 85.0 5.13e-01 100.0% 61.6%
5044308 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.89 85.0 5.21e-01 100.0% 58.2%
4934859 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.89 70.0 4.62e-01 81.7% 60.0%
4895332 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.88 73.0 4.63e-01 85.8% 66.8%
5057094 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.88 73.0 4.57e-01 85.8% 58.5%
4954935 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.88 84.0 5.10e-01 100.0% 59.5%
5074578 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.04e-01 100.0% 60.4%
5053026 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.15e-01 100.0% 67.4%
4987959 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.84 79.0 4.96e-01 98.3% 64.9%
5037576 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.83 79.0 5.11e-01 100.0% 64.1%
5030118 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.80 64.0 4.26e-01 82.5% 66.0%
4994565 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.78 73.0 4.78e-01 98.3% 68.5%
3510830 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.55 46.0 3.50e-01 89.2% 49.1%
3517735 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.54 38.0 3.20e-01 73.3% 78.5%
169819 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.51 38.0 3.05e-01 79.2% 66.4%
D4 medium residues 352-376_392-408_626-706_899-915_1121-1140
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13597.12 best NRDD 71.3 1.00e-19 86.9% 27.8%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aw7A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 45.0 3.59e-01 87.5% 80.3%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 28.0 3.65e-01 98.8% 93.4%
4ov4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 44.0 3.72e-01 95.0% 66.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4982642 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.91 88.0 5.78e-01 100.0% 78.0%
5001541 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.90 88.0 5.63e-01 100.0% 74.8%
4934728 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.90 88.0 5.64e-01 100.0% 73.8%
4954935 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.88 84.0 5.42e-01 100.0% 74.9%
4974476 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.87 84.0 5.33e-01 100.0% 75.3%
4961008 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.87 84.0 5.41e-01 100.0% 72.7%
5004456 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.87 84.0 5.32e-01 100.0% 74.0%
5048774 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.87 84.0 5.42e-01 100.0% 74.1%
5074578 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.86 83.0 5.40e-01 100.0% 72.8%
4976938 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.86 83.0 5.30e-01 100.0% 73.4%
5065401 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.23e-01 100.0% 70.8%
3603295 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.37e-01 100.0% 74.3%
5037353 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.30e-01 100.0% 73.2%
5079907 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.85 82.0 5.32e-01 100.0% 73.9%
5044308 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.85 82.0 5.31e-01 100.0% 69.6%
4970624 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.84 80.0 5.31e-01 100.0% 75.1%
4942624 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.83 71.0 5.04e-01 87.5% 100.0%
5057094 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.83 80.0 5.31e-01 100.0% 72.9%
4949117 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.83 78.0 5.40e-01 97.5% 87.0%
4987959 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.80 76.0 5.17e-01 100.0% 80.4%
3100301 2500.1.1.5 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD 0.80 77.0 4.91e-01 100.0% 73.7%
3222909 604.3.1.13 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF19 0.51 29.0 2.99e-01 73.8% 56.1%
4976041 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.50 45.0 3.90e-01 98.8% 63.3%
D5 medium residues 377-391_409-474_544-583
PDB
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 62.0 5.75e-01 74.4% 100.0%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 60.0 5.32e-01 76.0% 100.0%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 59.0 5.20e-01 76.0% 100.0%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 59.0 5.56e-01 76.9% 100.0%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 62.0 5.86e-01 81.0% 100.0%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 60.0 5.28e-01 81.0% 100.0%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 56.0 5.00e-01 76.0% 100.0%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.76 59.0 5.66e-01 81.8% 100.0%
1dfaA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.73 54.0 4.45e-01 76.0% 100.0%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.69 51.0 4.88e-01 76.9% 100.0%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.52 36.0 2.76e-01 71.9% 90.1%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.51 28.0 3.42e-01 81.0% 86.3%
1yb3A00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 31.0 2.86e-01 73.6% 43.0%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.79e-01 82.6% 88.5%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 33.0 3.60e-01 83.5% 81.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 67.0 5.94e-01 77.7% 100.0%
5065932 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 65.0 6.16e-01 76.9% 100.0%
4500960 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 63.0 5.86e-01 75.2% 100.0%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 68.0 6.33e-01 81.8% 100.0%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 64.0 5.76e-01 77.7% 100.0%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.84 63.0 5.93e-01 77.7% 100.0%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 63.0 5.66e-01 78.5% 100.0%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 59.0 5.72e-01 74.4% 100.0%
4950409 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 66.0 5.96e-01 83.5% 100.0%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 64.0 6.06e-01 81.8% 100.0%
4996523 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 63.0 5.23e-01 81.0% 100.0%
2675767 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 64.0 5.87e-01 82.6% 100.0%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 61.0 5.78e-01 78.5% 100.0%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 62.0 5.39e-01 80.2% 100.0%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.80 62.0 5.66e-01 80.2% 100.0%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.80 62.0 5.39e-01 80.2% 100.0%
4872043 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 61.0 5.65e-01 79.3% 100.0%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 58.0 5.18e-01 75.2% 100.0%
3949584 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 58.0 5.37e-01 75.2% 100.0%
3257888 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 59.0 5.44e-01 76.9% 100.0%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 61.0 5.51e-01 81.0% 100.0%
4933756 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 57.0 5.44e-01 75.2% 100.0%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 63.0 5.79e-01 83.5% 100.0%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 60.0 5.36e-01 80.2% 100.0%
4997597 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 61.0 5.66e-01 81.8% 100.0%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 61.0 5.38e-01 81.8% 100.0%
3495262 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 62.0 5.35e-01 83.5% 98.9%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 57.0 5.25e-01 77.7% 100.0%
3861422 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 62.0 5.22e-01 84.3% 100.0%
3174953 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.76 56.0 4.41e-01 75.2% 100.0%
4667152 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.76 60.0 5.45e-01 82.6% 100.0%
3877825 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.76 62.0 5.08e-01 86.0% 96.2%
2701967 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 56.0 5.40e-01 76.9% 100.0%
5032319 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.76 56.0 5.21e-01 76.9% 100.0%
259963 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.76 59.0 5.66e-01 81.8% 100.0%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.75 58.0 5.34e-01 79.3% 100.0%
3518586 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.75 63.0 5.16e-01 87.6% 100.0%
4565870 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.75 60.0 5.46e-01 83.5% 100.0%
4243055 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.75 62.0 5.16e-01 86.8% 100.0%
3602706 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.74 58.0 5.54e-01 81.8% 100.0%
2636473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.68 53.0 4.99e-01 81.8% 100.0%
5006284 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 30.0 3.63e-01 81.0% 84.0%
4257969 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 38.0 3.75e-01 74.4% 72.1%
5052888 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 36.0 3.65e-01 71.1% 80.0%
4050380 1.1.7.95 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 0.52 36.0 3.94e-01 70.2% 91.6%
4131100 1.1.7.87 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.52 36.0 3.52e-01 71.1% 67.4%
3988580 1.1.7.95 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 0.52 36.0 3.74e-01 70.2% 83.6%
1758564 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.51 39.0 3.45e-01 79.3% 98.9%
3264985 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 30.0 3.56e-01 80.2% 87.5%
3202614 4.1.1.146 beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like 0.50 35.0 2.57e-01 70.2% 37.7%
D6 medium residues 733-802
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m5hA02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 43.0 3.39e-01 74.3% 70.5%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.55 37.0 3.19e-01 70.0% 69.4%
1qa7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 40.0 3.49e-01 82.9% 82.7%
1fm0E00 3.90.1170.40 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit 0.52 38.0 3.08e-01 78.6% 69.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3922649 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.62 29.0 3.01e-01 71.4% 46.2%
3997517 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 40.0 4.04e-01 82.9% 97.1%
3841251 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.50 27.0 3.13e-01 71.4% 72.0%
D7 medium residues 803-898
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 75.0 6.01e-01 89.6% 49.7%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 72.0 5.82e-01 91.7% 48.8%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 70.0 5.67e-01 89.6% 47.9%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 69.0 5.90e-01 93.8% 55.9%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 67.0 5.43e-01 89.6% 47.6%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 68.0 5.50e-01 89.6% 50.3%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 68.0 5.35e-01 89.6% 54.1%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 68.0 5.42e-01 89.6% 48.6%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 66.0 5.67e-01 88.5% 59.9%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 66.0 5.24e-01 89.6% 62.4%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.68 57.0 4.97e-01 90.6% 95.7%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.93 71.0 6.05e-01 90.6% 52.4%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.92 67.0 5.87e-01 87.5% 53.3%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.92 73.0 5.88e-01 89.6% 47.9%
4054994 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 71.0 5.70e-01 93.8% 45.9%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.91 73.0 6.09e-01 92.7% 53.3%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 70.0 5.69e-01 88.5% 47.3%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 73.0 5.89e-01 89.6% 48.2%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 70.0 5.61e-01 88.5% 45.9%
4993808 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 71.0 6.06e-01 92.7% 55.2%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 73.0 6.23e-01 92.7% 57.2%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 68.0 4.73e-01 90.6% 28.0%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 70.0 6.04e-01 94.8% 57.1%
4992651 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 71.0 5.78e-01 93.8% 49.7%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 71.0 5.78e-01 90.6% 49.7%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 75.0 6.15e-01 94.8% 54.4%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 65.0 5.43e-01 90.6% 48.4%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 70.0 5.66e-01 93.8% 49.1%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 70.0 5.91e-01 89.6% 54.7%
4978263 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 67.0 5.48e-01 92.7% 47.9%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 68.0 5.80e-01 92.7% 55.2%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 74.0 5.90e-01 92.7% 50.3%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 76.0 5.94e-01 94.8% 50.3%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 75.0 5.82e-01 93.8% 54.7%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 73.0 5.88e-01 91.7% 52.9%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 71.0 6.09e-01 93.8% 59.3%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 71.0 5.67e-01 90.6% 53.3%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 70.0 5.61e-01 92.7% 48.6%
4388671 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 71.0 5.61e-01 89.6% 53.3%
4326329 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 66.0 5.39e-01 94.8% 47.6%
4946209 69.1.1.18 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV 0.83 71.0 5.35e-01 89.6% 73.2%
164902 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 69.0 5.50e-01 94.8% 47.2%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 71.0 5.39e-01 91.7% 55.7%
5012699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 69.0 5.58e-01 88.5% 64.7%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.82 72.0 5.99e-01 100.0% 57.4%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 71.0 5.30e-01 91.7% 59.1%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 72.0 5.90e-01 92.7% 57.5%
4943231 69.1.1.16 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab 0.81 71.0 5.64e-01 92.7% 52.8%
4342207 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 70.0 5.87e-01 92.7% 58.0%
5024341 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 72.0 5.61e-01 93.8% 57.3%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 65.0 5.41e-01 92.7% 52.3%
2675767 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 70.0 5.86e-01 92.7% 59.7%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 68.0 5.35e-01 89.6% 54.1%
4998392 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 69.0 5.62e-01 91.7% 61.8%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 5.82e-01 100.0% 62.3%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 73.0 5.81e-01 100.0% 62.3%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.70 58.0 4.80e-01 90.6% 94.1%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.67 55.0 4.45e-01 88.5% 98.9%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.67 57.0 4.95e-01 90.6% 95.0%
3495262 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.63 53.0 4.28e-01 90.6% 88.3%
D8 medium residues 1142-1172
PDB