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term6_stool_scaffold_5_prodigal-single.1__X__X__00039
Bact-Virterm6_stool_scaffold_5_prodigal-single.1__X__X__00039
Identity
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-45_120-199
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eheA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.60 | 23.0 | 2.61e-01 | 92.8% | 43.8% |
D2
medium
residues 46-119
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b3wA00 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.76 | 69.0 | 5.24e-01 | 100.0% | 47.6% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.57 | 33.0 | 3.15e-01 | 94.6% | 45.7% |
| 2ckwA04 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.56 | 36.0 | 3.23e-01 | 91.9% | 44.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705063 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.82 | 75.0 | 5.92e-01 | 100.0% | 55.9% |
| 4028386 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.80 | 74.0 | 5.49e-01 | 100.0% | 58.9% |
| 3600506 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.79 | 72.0 | 5.63e-01 | 100.0% | 54.0% |
| 3281506 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.78 | 72.0 | 5.62e-01 | 100.0% | 51.3% |
| 3264987 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.76 | 70.0 | 5.52e-01 | 100.0% | 54.5% |
| 7671 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.76 | 69.0 | 5.31e-01 | 100.0% | 50.0% |
| 3995458 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.75 | 68.0 | 5.52e-01 | 100.0% | 69.6% |
| 3923757 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.72 | 65.0 | 4.93e-01 | 100.0% | 52.4% |
| 3999784 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.70 | 63.0 | 4.65e-01 | 100.0% | 48.4% |
| 4572662 | 601.7.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › GlnD_UR_UTase | 0.64 | 41.0 | 3.24e-01 | 97.3% | 33.3% |
| 3259418 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 44.0 | 2.81e-01 | 95.9% | 74.9% |