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term6_stool_scaffold_5_prodigal-single.1__X__X__00055

Bact-Vir

term6_stool_scaffold_5_prodigal-single.1__X__X__00055

Identity

Kingdom:
phage

Quality

80.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-87
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dlbA00 3.10.20.330 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function YopT 0.62 27.0 2.96e-01 85.1% 48.6%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 43.0 2.82e-01 88.5% 91.8%
3ju4A04 4.10.1090.10 Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4 0.54 38.0 3.22e-01 73.6% 64.3%
2ebfX04 3.40.50.11550 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 36.0 2.54e-01 70.1% 91.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.83 36.0 2.57e-01 80.5% 16.8%
5082452 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.67 46.0 3.31e-01 72.4% 45.9%
3519143 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.58 48.0 3.21e-01 86.2% 44.9%
4363280 601.1.2.53 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DGKD_4H 0.55 38.0 3.12e-01 70.1% 98.1%
3292448 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.53 34.0 2.53e-01 70.1% 26.8%