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term6_stool_scaffold_5_prodigal-single.1__X__X__00106
Bact-Virterm6_stool_scaffold_5_prodigal-single.1__X__X__00106
Identity
- Kingdom:
- phage
Quality
66.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-89
Domain cluster:
rep: MW735835.1__QTH80352.1__PA10_00152__00152__D18-84
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 37.0 | 3.20e-01 | 100.0% | 37.9% |
| 5bykA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 42.0 | 3.03e-01 | 79.1% | 53.1% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 47.0 | 3.24e-01 | 95.3% | 92.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262959 | 109.4.1.369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAPC1 | 0.55 | 41.0 | 3.30e-01 | 81.4% | 45.9% |
| 3810912 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.54 | 36.0 | 4.01e-01 | 98.8% | 90.8% |
| 3826105 | 185.1.1.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 0.52 | 35.0 | 3.82e-01 | 97.7% | 88.4% |
| 3471903 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 38.0 | 3.06e-01 | 76.7% | 87.6% |
| 3388967 | 109.4.1.369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAPC1 | 0.51 | 40.0 | 3.39e-01 | 97.7% | 48.4% |
| 5061450 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.51 | 38.0 | 3.76e-01 | 82.6% | 93.7% |
| 3507044 | 7568.1.1.20 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PF29099 | 0.50 | 38.0 | 3.67e-01 | 84.9% | 86.0% |
D2
high
residues 100-141
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dniB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.76 | 54.0 | 4.27e-01 | 76.2% | 37.1% |
| 1ldjA04 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.65 | 48.0 | 3.76e-01 | 92.9% | 35.7% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.64 | 46.0 | 3.50e-01 | 76.2% | 35.0% |
| 3htmA02 | 6.10.250.3030 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 45.0 | 4.66e-01 | 83.3% | 85.0% |
| 4q45A03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 39.0 | 3.72e-01 | 83.3% | 100.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4890281 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.78 | 56.0 | 5.48e-01 | 78.6% | 71.7% |
| 4374496 | 103.1.1.24 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › BIRC2-3-like_UBA | 0.59 | 40.0 | 3.82e-01 | 85.7% | 60.0% |