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term6_stool_scaffold_5_prodigal-single.1__X__X__00183
Bact-Virterm6_stool_scaffold_5_prodigal-single.1__X__X__00183
Identity
- Kingdom:
- phage
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 325-427
D2
medium
residues 14-33_1055-1134
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.60 | 38.0 | 3.14e-01 | 79.0% | 34.8% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 42.0 | 2.84e-01 | 85.0% | 96.1% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.31e-01 | 77.0% | 63.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3689239 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.59 | 34.0 | 3.68e-01 | 72.0% | 65.9% |
| 3446815 | 304.112.1.3 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoN | 0.53 | 28.0 | 2.97e-01 | 74.0% | 54.4% |
| 4276635 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.51 | 37.0 | 3.74e-01 | 76.0% | 78.0% |
| 3194837 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 35.0 | 2.41e-01 | 71.0% | 54.1% |
D3
medium
residues 719-789
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3djlA02 | 6.10.250.600 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 34.0 | 3.70e-01 | 74.6% | 77.8% |
| 2o6yA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.55 | 46.0 | 3.09e-01 | 97.2% | 98.4% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 30.0 | 2.99e-01 | 98.6% | 51.4% |
| 1m5q102 | 3.30.310.60 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain | 0.50 | 36.0 | 3.90e-01 | 94.4% | 93.1% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.50 | 42.0 | 2.79e-01 | 98.6% | 27.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4936900 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.60 | 41.0 | 2.47e-01 | 71.8% | 25.8% |
| 3515089 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.57 | 36.0 | 3.75e-01 | 100.0% | 67.6% |
| 4400635 | 327.1.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain › Pro_Al_protease | 0.57 | 40.0 | 4.18e-01 | 100.0% | 81.5% |
| 3175971 | 109.37.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Anion channel SLAC1-related › Anion channel SLAC1-related › SLAC1 | 0.56 | 39.0 | 2.47e-01 | 74.6% | 93.5% |
| 3832382 | 5069.1.3.60 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › OST3_OST6 | 0.55 | 38.0 | 3.27e-01 | 73.2% | 67.5% |
| 5004320 | 2006.1.4.24 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_12 | 0.54 | 39.0 | 2.75e-01 | 84.5% | 23.5% |
| 4057016 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.54 | 42.0 | 2.81e-01 | 90.1% | 81.9% |
| 3627960 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.53 | 44.0 | 2.64e-01 | 97.2% | 60.2% |
| 3410445 | 627.1.1.4 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › PF26202 | 0.52 | 35.0 | 2.83e-01 | 100.0% | 35.7% |
| None | — | 0.51 | 41.0 | 2.34e-01 | 97.2% | 62.1% | |
| 3182124 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.50 | 34.0 | 3.38e-01 | 95.8% | 66.7% |
| 3475750 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 42.0 | 2.39e-01 | 97.2% | 49.1% |
| 5048760 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.50 | 40.0 | 2.38e-01 | 88.7% | 14.9% |
D4
medium
residues 856-1054
Domain cluster:
rep: OQ790161.1__WJJ55196.1__X__00319__D17-208