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terminal_protein
Euk-VirDeer_mastadenovirus_B
terminal_protein__YP_009373239__Deer_mastadenovirus_B__2170000
Identity
- Accession:
- YP_009373239 ↗
- Protein ID:
- terminal_protein
- Kingdom:
- euk
Quality
74.1
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Deer_mastadenovirus_B
TaxID: 2170000
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-125_594-619
Domain cluster:
rep: pTP__YP_009051655__Lizard_adenovirus_2__874272__D3-127_576-605
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02459.21 best | Adeno_terminal | 72.2 | 5.00e-20 | 46.6% | 12.4% |
D2
high
residues 127-139_454-588
Domain cluster:
rep: pre-terminal_protein__YP_009272876__Bat_mastadenovirus_WIV12__1788434__D126-197_452-483_541-562
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02459.21 best | Adeno_terminal | 192.3 | 1.90e-56 | 93.2% | 24.8% |
D3
medium
residues 216-354_400-453
Domain cluster:
rep: pTP__YP_003933582__Turkey_adenovirus_1__878329__D222-378_434-464
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02459.21 best | Adeno_terminal | 106.5 | 2.00e-30 | 74.1% | 24.3% |
| PF02459.21 | Adeno_terminal | 51.2 | 1.10e-13 | 28.5% | 9.8% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 33.0 | 4.04e-01 | 81.9% | 73.2% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.59 | 30.0 | 3.85e-01 | 96.4% | 81.0% |
| 1r2jA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 30.0 | 3.37e-01 | 96.9% | 73.6% |
| 6y4rA01 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.51 | 26.0 | 2.87e-01 | 91.2% | 55.8% |
| 2pgsA02 | 1.10.3550.10 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › eoxyguanosinetriphosphate triphosphohydrolase domain-like | 0.51 | 22.0 | 2.73e-01 | 78.8% | 61.3% |
| 1xqoA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 32.0 | 3.74e-01 | 77.2% | 91.1% |