terminal_protein_precursor_pTP

Euk-Vir

Human_mastadenovirus_B

terminal_protein_precursor_pTP__YP_002213832__Human_mastadenovirus_B__108098

Identity

74.2 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Human_mastadenovirus_B

TaxID: 108098

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-125_598-624

PDB

Domain cluster: rep: pTP__YP_009051655__Lizard_adenovirus_2__874272__D3-127_576-605

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	99.7	2.30e-28	46.0%	12.4%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dg8A02	3.30.300.30	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain	0.54	24.0	2.93e-01	70.3%	64.1%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3225764	840.1.1.0 ↗	a+b two layers › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit	0.51	22.0	3.00e-01	81.1%	86.7%

D2 medium residues 234-249_273-292_330-373_404-435

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	57.1	1.80e-15	40.2%	7.5%
PF02459.21	Adeno_terminal	36.0	4.40e-09	37.5%	7.5%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dmvA01	1.20.58.1190	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.64	30.0	3.39e-01	100.0%	55.3%
2kw6A00	6.10.140.1300	Special › Helix non-globular › Helix Hairpins ›	0.59	30.0	3.76e-01	97.3%	81.5%
2juaA00	1.20.1480.30	Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Designed four-helix bundle protein	0.59	30.0	3.16e-01	100.0%	50.0%
2oduA02	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.55	34.0	3.53e-01	100.0%	66.7%
1fm2A00	1.10.439.10	Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1	0.50	27.0	2.52e-01	85.7%	36.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3957449	101.11.1.1 ↗	alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase	0.51	30.0	3.23e-01	100.0%	66.0%

D3 medium residues 475-597

PDB

Domain cluster: rep: pre-terminal_protein__YP_009272876__Bat_mastadenovirus_WIV12__1788434__D126-197_452-483_541-562

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02459.21 best	Adeno_terminal	172.6	1.80e-50	100.0%	22.4%