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terminase_DNA_binding_subunit_2

Euk-Vir

Vombatid_gammaherpesvirus_1

terminase_DNA_binding_subunit_2__YP_010087382__Vombatid_gammaherpesvirus_1__2052651

Identity

Accession:
YP_010087382 ↗
Protein ID:
terminase_DNA_binding_subunit_2
Kingdom:
euk

Quality

78.1 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Vombatid_gammaherpesvirus_1

TaxID: 2052651

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-107
PDB
Domain cluster: rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01366.24 best PRTP 69.5 2.40e-19 99.1% 16.9%
D2 medium residues 496-522_580-597_617-681
PDB
Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_010085884__Wood_mouse_herpesvirus__432370__D461-483_571-651
D3 medium residues 523-579_598-616
PDB
Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_009388512__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D489-508_536-596
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01366.24 best PRTP 54.4 8.90e-15 84.2% 9.0%