terminase

Euk-Vir

Phascolarctid_gammaherpesvirus_1

terminase__YP_010087471__Phascolarctid_gammaherpesvirus_1__2249313

Identity

72.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Phascolarctid_gammaherpesvirus_1

TaxID: 2249313

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-136

PDB

D2 high residues 462-621_661-683

PDB

Domain cluster: rep: tegument_protein_UL16__YP_010087586__Cervid_alphaherpesvirus_3__2115790__D494-638_653-663

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	214.1	4.50e-63	87.4%	44.7%

D3 medium residues 139-213

PDB

Domain cluster: rep: cleavage_packaging_protein__YP_004207870__Cricetid_gammaherpesvirus_2__1605972__D137-212

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02500.23 best	DNA_pack_N	83.1	4.00e-23	100.0%	28.8%

D4 medium residues 214-355

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	32.6	9.10e-08	97.9%	52.6%
PF02500.23	DNA_pack_N	159.9	1.40e-46	69.7%	35.8%

D5 medium residues 443-461_622-660

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_1__YP_004940252__Saimiriine_betaherpesvirus_4__1535247__D425-441_605-646

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02499.23 best	DNA_pack_C	33.2	4.60e-08	72.4%	11.4%