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thiol_protease
Euk-VirPhaeocystis_globosa_virus
thiol_protease__YP_008052642__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052642 ↗
- Protein ID:
- thiol_protease
- Kingdom:
- euk
Quality
72.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 112-293
Domain cluster:
rep: hypothetical_protein_crov231__YP_003969863__Cafeteria_roenbergensis_virus_BV-PW1__693272__D45-278
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02902.26 best | Peptidase_C48 | 38.5 | 1.60e-09 | 73.1% | 51.6% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1th0B00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.75 | 70.0 | 6.47e-01 | 100.0% | 79.4% |
| 1xt9A00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.75 | 71.0 | 6.77e-01 | 100.0% | 87.5% |
| 4ekfA00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.72 | 64.0 | 6.35e-01 | 96.7% | 88.5% |
| 1euvA02 | 3.30.310.130 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related | 0.68 | 40.0 | 5.20e-01 | 77.5% | 100.0% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.63 | 31.0 | 4.32e-01 | 75.3% | 96.5% |
| 1tigA00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.62 | 30.0 | 4.10e-01 | 71.4% | 93.2% |
| 7c2gG01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.60 | 30.0 | 4.28e-01 | 83.0% | 100.0% |
| 3lyhA00 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 35.0 | 4.10e-01 | 94.0% | 84.2% |
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.57 | 31.0 | 4.15e-01 | 83.0% | 99.0% |
| 5ysnB02 | 3.40.50.11240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ethanolamine ammonia-lyase light chain (EutC) | 0.57 | 38.0 | 3.83e-01 | 87.9% | 65.4% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.54 | 33.0 | 3.89e-01 | 83.5% | 89.2% |
| 2b99C00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.54 | 40.0 | 4.30e-01 | 91.2% | 90.8% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.54 | 32.0 | 3.49e-01 | 83.0% | 70.3% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.53 | 32.0 | 3.71e-01 | 95.6% | 82.8% |
| 2yv4A00 | 3.40.50.11030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain | 0.52 | 28.0 | 3.60e-01 | 96.2% | 91.2% |
| 3pbkA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.52 | 31.0 | 3.79e-01 | 76.9% | 96.3% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.52 | 35.0 | 3.89e-01 | 83.5% | 85.1% |
| 4lizA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 35.0 | 3.95e-01 | 70.9% | 89.9% |
| 1d0nA03 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 31.0 | 3.66e-01 | 81.9% | 87.6% |
| 1lw7A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 34.0 | 3.59e-01 | 100.0% | 72.2% |
| 1jjfA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 3.62e-01 | 84.1% | 73.7% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.78 | 70.0 | 6.57e-01 | 100.0% | 79.1% | |
| 7400 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.78 | 70.0 | 6.49e-01 | 100.0% | 77.4% |
| 2410593 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.78 | 73.0 | 6.30e-01 | 98.9% | 85.0% |
| 3416006 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.76 | 71.0 | 6.46e-01 | 100.0% | 77.0% |
| 3783242 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.76 | 69.0 | 6.32e-01 | 100.0% | 75.7% |
| 3696004 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.75 | 71.0 | 6.48e-01 | 100.0% | 79.1% |
| 3498187 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.75 | 71.0 | 6.46e-01 | 100.0% | 77.4% |
| 3466516 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 70.0 | 6.34e-01 | 100.0% | 86.3% |
| 3737708 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 71.0 | 6.25e-01 | 100.0% | 79.7% |
| 3209165 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 71.0 | 6.29e-01 | 100.0% | 74.7% |
| 3875060 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 70.0 | 6.50e-01 | 100.0% | 83.6% |
| 3776113 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 70.0 | 6.13e-01 | 100.0% | 87.7% |
| 3404797 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 69.0 | 6.56e-01 | 100.0% | 86.1% |
| 3517168 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 70.0 | 6.43e-01 | 100.0% | 84.9% |
| 3626575 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.74 | 69.0 | 6.54e-01 | 100.0% | 87.3% |
| 3256272 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 70.0 | 6.34e-01 | 100.0% | 79.9% |
| 3369707 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 70.0 | 5.89e-01 | 100.0% | 64.9% |
| 3659695 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 69.0 | 6.43e-01 | 100.0% | 87.9% |
| 4026880 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 70.0 | 6.25e-01 | 100.0% | 80.0% |
| 3189169 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 69.0 | 6.38e-01 | 100.0% | 85.3% |
| 3228402 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 67.0 | 6.38e-01 | 100.0% | 84.8% |
| 3410176 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 69.0 | 6.46e-01 | 100.0% | 87.0% |
| 3974984 | 219.1.1.67 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ElaD-SseL-like_C,ElaD_SseL-like_N | 0.73 | 69.0 | 5.56e-01 | 100.0% | 67.4% |
| 3994259 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 68.0 | 6.22e-01 | 100.0% | 91.1% |
| 3788927 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.73 | 68.0 | 6.07e-01 | 100.0% | 94.0% |
| 3258711 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.72 | 68.0 | 6.11e-01 | 100.0% | 88.1% |
| 153044 | 219.1.1.5 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C5 | 0.72 | 64.0 | 6.35e-01 | 96.7% | 88.5% |
| 3794680 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.71 | 67.0 | 5.94e-01 | 100.0% | 79.1% |
| 3737961 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.71 | 67.0 | 6.31e-01 | 100.0% | 87.9% |
| 3323220 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.71 | 67.0 | 5.71e-01 | 100.0% | 84.3% |
| 3738382 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.71 | 66.0 | 6.01e-01 | 100.0% | 78.3% |
| 3635663 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.71 | 66.0 | 5.81e-01 | 100.0% | 90.4% |
| 4236698 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.70 | 66.0 | 5.70e-01 | 100.0% | 92.2% |
| 3677902 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.70 | 65.0 | 4.49e-01 | 100.0% | 34.7% |
| 3826010 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.69 | 65.0 | 5.59e-01 | 100.0% | 80.0% |
| 1870510 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.67 | 63.0 | 5.16e-01 | 100.0% | 87.0% |
| 3678661 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.66 | 61.0 | 4.30e-01 | 100.0% | 45.5% |
| 3248679 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 55.0 | 5.81e-01 | 91.8% | 99.4% |
| 2323988 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.65 | 60.0 | 4.89e-01 | 100.0% | 82.5% |
| 5071835 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.62 | 32.0 | 4.44e-01 | 82.4% | 98.9% |
| 4997461 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.61 | 30.0 | 4.31e-01 | 76.4% | 97.8% |
| 2643927 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.61 | 31.0 | 4.34e-01 | 72.0% | 100.0% |
| 5045327 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.61 | 32.0 | 4.38e-01 | 72.5% | 100.0% |
| 4998632 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.61 | 32.0 | 4.13e-01 | 72.5% | 90.0% |
| 5000415 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.60 | 31.0 | 4.04e-01 | 72.0% | 86.7% |
| 3526484 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.58 | 32.0 | 3.83e-01 | 84.6% | 76.8% |
| 4997307 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.57 | 31.0 | 4.06e-01 | 85.2% | 95.0% |
| 3654558 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.57 | 50.0 | 5.14e-01 | 95.1% | 100.0% |
| 4976954 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.56 | 29.0 | 3.88e-01 | 72.0% | 100.0% |
| 5072973 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.56 | 33.0 | 4.20e-01 | 86.3% | 99.0% |
| 4202670 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.55 | 32.0 | 2.98e-01 | 76.9% | 44.4% |
| 5053500 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.54 | 31.0 | 4.01e-01 | 83.0% | 100.0% |
| 4929304 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 31.0 | 3.55e-01 | 87.9% | 82.3% |
| 3213642 | 7572.1.1.1 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › PFK | 0.50 | 34.0 | 4.01e-01 | 97.3% | 100.0% |
D2
medium
residues 18-108