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thymidina_kinase
Euk-VirBubaline_alphaherpesvirus_1
thymidina_kinase__YP_009664657__Bubaline_alphaherpesvirus_1__202910
Identity
- Accession:
- YP_009664657 ↗
- Protein ID:
- thymidina_kinase
- Kingdom:
- euk
Quality
87.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Bubaline_alphaherpesvirus_1
TaxID: 202910
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-70_82-120_330-347
Domain cluster:
rep: ORF38_gene_product__YP_006273018__Equid_alphaherpesvirus_8__39637__D59-120_334-352
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00693.25 best | Herpes_TK | 26.3 | 6.00e-06 | 72.2% | 21.8% |
D2
medium
residues 121-329
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00693.25 best | Herpes_TK | 170.5 | 6.80e-50 | 87.1% | 62.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e2jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.93 | 83.0 | 7.05e-01 | 100.0% | 62.1% |
| 1p72A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.93 | 90.0 | 7.55e-01 | 100.0% | 93.5% |
| 1osnC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.91 | 89.0 | 7.49e-01 | 100.0% | 95.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 9546 | 2004.1.1.52 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_TK | 0.96 | 89.0 | 7.41e-01 | 100.0% | 61.2% |
| 1322887 | 2004.1.1.52 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_TK | 0.94 | 83.0 | 7.06e-01 | 100.0% | 61.8% |
| 9545 | 2004.1.1.52 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_TK | 0.93 | 91.0 | 7.48e-01 | 100.0% | 93.7% |
| 4375459 | 5051.1.1.8 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › BCCT | 0.53 | 38.0 | 2.92e-01 | 72.2% | 91.9% |
| 4385057 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.52 | 40.0 | 4.19e-01 | 95.2% | 86.3% |