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thymidine_kinase
Euk-VirMicromonas_pusilla_virus_12T
thymidine_kinase__YP_007676249__Micromonas_pusilla_virus_12T__755272
Identity
- Accession:
- YP_007676249 ↗
- Protein ID:
- thymidine_kinase
- Kingdom:
- euk
Quality
87.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Micromonas_pusilla_virus_12T
TaxID: 755272
Cluster
View cluster (85 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-134
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00265.25 best | TK | 95.0 | 6.70e-27 | 100.0% | 76.1% |
D2
high
residues 136-177
Domain cluster:
rep: Thymidine_kinase__YP_009703106__African_swine_fever_virus__10497__D144-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00265.25 best | TK | 35.2 | 1.60e-08 | 97.6% | 21.6% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w4rA02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.96 | 85.0 | 8.56e-01 | 100.0% | 95.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3674153 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.98 | 88.0 | 5.30e-01 | 100.0% | 18.2% |
| 3717094 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.98 | 89.0 | 5.38e-01 | 100.0% | 18.2% |
| 1868224 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.97 | 89.0 | 7.68e-01 | 100.0% | 67.2% |
| 3362574 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.97 | 83.0 | 8.51e-01 | 95.2% | 95.0% |
| 4517886 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.92 | 78.0 | 7.69e-01 | 97.6% | 86.7% |
| 1636870 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.89 | 79.0 | 7.66e-01 | 100.0% | 89.1% |
| 4081305 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.88 | 76.0 | 4.82e-01 | 100.0% | 21.1% |
| 5058383 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.87 | 78.0 | 7.39e-01 | 100.0% | 94.0% |
| 4093322 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.83 | 75.0 | 6.17e-01 | 100.0% | 63.0% |
| 163182 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.81 | 72.0 | 6.75e-01 | 100.0% | 90.2% |
| 4074154 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.80 | 66.0 | 6.45e-01 | 90.5% | 93.3% |
| 4007998 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.80 | 71.0 | 4.47e-01 | 100.0% | 22.0% |
| 4675823 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.80 | 70.0 | 6.08e-01 | 100.0% | 69.2% |
| 4355340 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 69.0 | 6.31e-01 | 100.0% | 85.5% |
| 3588905 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.78 | 69.0 | 6.54e-01 | 100.0% | 90.0% |
| 3977110 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.71 | 62.0 | 4.95e-01 | 100.0% | 58.8% |
| 3304358 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 52.0 | 4.43e-01 | 100.0% | 77.1% |
| 3798304 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.58 | 40.0 | 3.01e-01 | 100.0% | 24.8% |