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transactivating_tegument_protein_VP16
Euk-VirHuman_alphaherpesvirus_2
transactivating_tegument_protein_VP16__YP_009137200__Human_alphaherpesvirus_2__10310
Identity
- Accession:
- YP_009137200 ↗
- Protein ID:
- transactivating_tegument_protein_VP16
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Human_alphaherpesvirus_2
TaxID: 10310
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-68_92-249_336-352
Domain cluster:
rep: transactivating_tegument_protein_VP16__YP_002333493__Equid_alphaherpesvirus_9__55744__D57-147_162-249_335-395
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02232.20 best | Alpha_TIF | 276.5 | 4.70e-82 | 91.0% | 48.1% |
D2
medium
residues 69-91_250-335
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02232.20 best | Alpha_TIF | 140.5 | 1.10e-40 | 79.8% | 25.1% |
| PF02232.20 | Alpha_TIF | 32.2 | 8.90e-08 | 22.0% | 6.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.96 | 93.0 | 6.38e-01 | 100.0% | 85.9% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7584 | 816.1.1.1 ↗ | a+b complex topology › Conserved core of transcriptional regulatory protein vp16 › Conserved core of transcriptional regulatory protein vp16 › Conserved core of transcriptional regulatory protein vp16 › Alpha_TIF | 0.96 | 93.0 | 6.42e-01 | 100.0% | 88.1% |