transactivating_tegument_protein_VP16

Euk-Vir

Equid_alphaherpesvirus_1

transactivating_tegument_protein_VP16__YP_053057__Equid_alphaherpesvirus_1__10326

Identity

75.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_1

TaxID: 10326

View cluster (32 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 83-133

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02232.20 best	Alpha_TIF	34.4	2.00e-08	98.0%	11.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2qk2A01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.55	42.0	2.85e-01	84.3%	79.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3859084	109.4.1.470 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2	0.51	39.0	2.56e-01	100.0%	55.1%

D2 medium residues 134-258

PDB

Domain cluster: rep: transactivating_tegument_protein_VP16__YP_009176885__Testudinid_alphaherpesvirus_3__2560801__D132-171_186-238_328-350

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02232.20 best	Alpha_TIF	134.3	8.10e-39	100.0%	36.4%

D3 medium residues 259-331_406-417

PDB

Domain cluster: rep: transactivating_tegument_protein_VP16__YP_009137200__Human_alphaherpesvirus_2__10310__D69-91_250-335

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02232.20 best	Alpha_TIF	93.0	2.80e-26	100.0%	22.7%

D4 medium residues 418-447

PDB