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transactivator
Euk-VirHuman_betaherpesvirus_6B
transactivator__NP_050185__Human_betaherpesvirus_6B__32604
Identity
- Accession:
- NP_050185 ↗
- Protein ID:
- transactivator
- Kingdom:
- euk
Quality
80.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Roseolovirus›
Human_betaherpesvirus_6B
TaxID: 32604
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-198
Domain cluster:
rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02393.22 best | US22 | 63.8 | 2.40e-17 | 85.2% | 88.7% |
D2
high
residues 210-323
Domain cluster:
rep: US22_family_homolog__YP_214036__Murid_betaherpesvirus_1__10366__D272-375
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hg1A00 | 3.40.1580.30 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Domain of unknown function (DUF5066) | 0.57 | 49.0 | 4.02e-01 | 97.4% | 80.2% |
| 2ftxA00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.56 | 39.0 | 4.30e-01 | 86.8% | 93.3% |
| 4l1mB00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.52 | 42.0 | 3.00e-01 | 87.7% | 57.4% |
| 1xksA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.96e-01 | 87.7% | 42.5% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.52 | 39.0 | 3.79e-01 | 93.9% | 70.7% |
| 3jamg01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 3.12e-01 | 89.5% | 67.4% |
| 1wzvA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 44.0 | 4.07e-01 | 95.6% | 75.3% |
| 2pm9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.28e-01 | 97.4% | 99.4% |
| 1q1uA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 38.0 | 3.64e-01 | 78.9% | 97.1% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 38.0 | 3.32e-01 | 87.7% | 50.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3952333 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.59 | 33.0 | 4.35e-01 | 82.5% | 100.0% |
| 3436651 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 49.0 | 3.47e-01 | 91.2% | 96.6% |
| 1007197 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 33.0 | 3.93e-01 | 80.7% | 90.8% |
| 3172241 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.54 | 44.0 | 2.88e-01 | 86.8% | 66.0% |
| 3620195 | 5.1.4.289 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, ANAPC4_WD40 | 0.54 | 47.0 | 3.54e-01 | 99.1% | 96.7% |
| 3792453 | 5.1.4.442 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, KNTC1_N | 0.53 | 48.0 | 3.58e-01 | 100.0% | 100.0% |
| 3640780 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 46.0 | 3.17e-01 | 97.4% | 72.1% |
| 3337399 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.52 | 38.0 | 3.75e-01 | 88.6% | 69.6% |
| 3453517 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 45.0 | 3.07e-01 | 95.6% | 67.1% |
| 4311698 | 241.2.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › PF26204 | 0.52 | 41.0 | 4.17e-01 | 95.6% | 87.3% |
| 3410461 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 45.0 | 3.25e-01 | 100.0% | 98.6% |
| 3848744 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 44.0 | 2.98e-01 | 98.2% | 71.9% |
| 3901826 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.51 | 44.0 | 2.90e-01 | 97.4% | 84.0% |
| 4014408 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 3.14e-01 | 97.4% | 94.0% |
| 3185751 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.51 | 45.0 | 3.07e-01 | 97.4% | 95.8% |
| 4018087 | 4099.1.1.31 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF26204 | 0.51 | 36.0 | 3.91e-01 | 82.5% | 89.5% |
| 3169647 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 45.0 | 3.23e-01 | 100.0% | 87.8% |