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transcription_factor_S-II-related_protein

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

transcription_factor_S-II-related_protein__YP_003986841__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986841 ↗
Protein ID:
transcription_factor_S-II-related_protein
Kingdom:
euk

Quality

81.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-110
PDB
Domain cluster: rep: transcription_elongation_factor_TFIIS_C_domain-containing_protein__YP_008052514__Phaeocystis_globosa_virus__251749__D11-103
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.84 48.0 5.45e-01 83.0% 74.0%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 46.0 4.66e-01 85.0% 62.7%
1nv8B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.70 45.0 5.28e-01 90.0% 93.0%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.69 50.0 5.24e-01 91.0% 83.5%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.68 47.0 5.21e-01 91.0% 91.1%
1kxpD04 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.65 38.0 4.25e-01 90.0% 75.3%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.64 50.0 5.29e-01 98.0% 95.4%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.64 44.0 4.81e-01 79.0% 89.7%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.64 48.0 5.02e-01 93.0% 88.6%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.62 52.0 3.74e-01 90.0% 82.3%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.58 40.0 3.45e-01 70.0% 52.9%
6qs7C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 52.0 4.77e-01 99.0% 95.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 4.00e-01 91.0% 85.1%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 46.0 4.16e-01 89.0% 85.1%
8itfR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.57 44.0 3.25e-01 84.0% 82.5%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 38.0 3.81e-01 70.0% 88.5%
2r0rB00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.56 33.0 3.58e-01 87.0% 71.8%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 36.0 3.94e-01 70.0% 84.8%
3fnrA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.54 43.0 3.88e-01 87.0% 70.3%
3bg2A03 1.10.3410.10 Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain 0.54 40.0 4.16e-01 80.0% 87.5%
6b8hO01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.53 34.0 3.45e-01 92.0% 63.6%
5gl7A01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.53 43.0 3.65e-01 88.0% 85.5%
4bemJ00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.53 44.0 3.66e-01 93.0% 61.3%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.52 42.0 3.72e-01 91.0% 63.9%
3cmnA01 1.20.150.30 Mainly Alpha › Up-down Bundle › Lysin › Zincin-like metallopeptidase, N-terminal domain 0.51 39.0 3.75e-01 83.0% 97.4%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 31.0 3.36e-01 83.0% 70.1%
2incB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.50 44.0 3.13e-01 100.0% 48.8%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260703 142.1.1.5 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI 0.73 48.0 5.34e-01 74.0% 85.0%
4164998 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.73 52.0 5.28e-01 91.0% 75.0%
4159969 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.72 53.0 5.28e-01 91.0% 73.3%
4185350 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.71 46.0 5.00e-01 74.0% 81.2%
4224947 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.65 52.0 5.14e-01 93.0% 81.9%
4015356 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.63 42.0 4.48e-01 70.0% 80.0%
3588608 3227.1.1.1 ↗ alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC 0.63 53.0 3.54e-01 92.0% 37.7%
3950299 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.63 50.0 4.80e-01 91.0% 74.8%
3596013 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 46.0 4.25e-01 77.0% 93.6%
3716307 3890.1.1.1 ↗ alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I 0.61 49.0 3.70e-01 86.0% 83.3%
4225289 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.61 53.0 5.12e-01 98.0% 86.1%
3867152 601.1.2.87 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › TMEM126 0.57 42.0 3.72e-01 78.0% 57.3%
3965415 3827.1.1.1 ↗ alpha duplicates or obligate multimers › Hypothetical protein PA0856 › Hypothetical protein PA0856 › Hypothetical protein PA0856 › DUF2059 0.57 41.0 3.91e-01 75.0% 90.0%
3966541 3827.1.1.0 ↗ alpha duplicates or obligate multimers › Hypothetical protein PA0856 › Hypothetical protein PA0856 › Hypothetical protein PA0856 0.57 41.0 3.67e-01 75.0% 69.0%
3593997 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.56 39.0 3.55e-01 71.0% 66.9%
4928071 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.54 47.0 3.37e-01 99.0% 39.7%
3231123 5001.1.1.33 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh 0.54 41.0 2.91e-01 82.0% 32.7%
3859555 601.19.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein 0.53 36.0 3.05e-01 70.0% 70.6%
4053116 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.53 35.0 3.87e-01 88.0% 85.0%
3617282 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 39.0 3.51e-01 78.0% 85.0%
3509997 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.50 35.0 2.82e-01 70.0% 96.1%
D2 high residues 121-172
PDB
Domain cluster: rep: putative_transcription_elongation_factor_S-II-related_protein__YP_009507517__Heterosigma_akashiwo_virus_01__97195__D153-194
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01096.24 best Zn_ribbon_TFIIS 64.2 1.00e-17 75.0% 97.4%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3po3S02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.84 72.0 6.35e-01 100.0% 66.2%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.81 72.0 6.98e-01 100.0% 89.5%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.76 57.0 6.10e-01 80.8% 95.6%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.76 67.0 5.93e-01 100.0% 69.7%
6gmhI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.76 66.0 6.01e-01 98.1% 79.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.71 52.0 3.20e-01 92.3% 13.3%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.70 52.0 3.20e-01 92.3% 14.4%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.70 47.0 4.32e-01 84.6% 54.5%
2xr1A03 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.68 48.0 3.08e-01 92.3% 15.1%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.68 43.0 4.63e-01 86.5% 77.3%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.68 52.0 5.33e-01 88.5% 91.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.63e-01 92.3% 64.6%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 44.0 4.07e-01 80.8% 53.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.69e-01 88.5% 76.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.18e-01 92.3% 56.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 4.79e-01 92.3% 73.6%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.79e-01 90.4% 83.0%
2fkcA01 3.40.1350.40 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.63 50.0 3.95e-01 88.5% 53.6%
2ky8A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.63 50.0 4.57e-01 100.0% 65.7%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 53.0 3.30e-01 100.0% 24.6%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 44.0 3.15e-01 90.4% 24.8%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.55e-01 90.4% 77.4%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.16e-01 88.5% 53.7%
2pimA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 47.0 3.69e-01 94.2% 78.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.40e-01 90.4% 72.7%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.60 42.0 3.81e-01 76.9% 52.7%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 51.0 2.97e-01 92.3% 39.9%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 4.00e-01 84.6% 63.3%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.58 44.0 3.47e-01 84.6% 48.7%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.63e-01 98.1% 50.7%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 44.0 2.87e-01 88.5% 44.3%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 45.0 2.86e-01 94.2% 44.4%
7fctA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 40.0 2.73e-01 90.4% 17.4%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 37.0 2.17e-01 100.0% 6.5%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 3.62e-01 100.0% 60.9%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 4.08e-01 88.5% 69.7%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 39.0 2.86e-01 76.9% 78.4%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.62e-01 100.0% 62.0%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 2.81e-01 88.5% 54.9%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 40.0 3.73e-01 80.8% 60.9%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 2.84e-01 100.0% 25.7%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.25e-01 80.8% 78.3%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 37.0 3.51e-01 80.8% 59.4%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.35e-01 80.8% 82.0%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.53 39.0 4.01e-01 90.4% 90.2%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.52 37.0 3.16e-01 80.8% 60.0%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 3.24e-01 80.8% 46.2%
4f9zA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 38.0 3.08e-01 80.8% 63.1%
1sjiA03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 42.0 3.32e-01 100.0% 71.0%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 40.0 3.42e-01 90.4% 81.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038934 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.95 90.0 8.59e-01 100.0% 89.7%
4937130 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.94 87.0 7.94e-01 100.0% 78.5%
3737071 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.92 80.0 7.69e-01 100.0% 83.1%
4945758 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.92 85.0 7.59e-01 100.0% 74.3%
3621358 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.91 85.0 7.81e-01 100.0% 81.5%
2800345 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.90 78.0 7.34e-01 100.0% 79.0%
3495913 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.89 81.0 7.72e-01 100.0% 85.0%
3755722 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.89 79.0 5.30e-01 98.1% 28.6%
3804890 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.89 81.0 7.70e-01 100.0% 86.4%
3816604 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.88 78.0 7.20e-01 98.1% 76.9%
4963635 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.87 80.0 7.21e-01 100.0% 75.4%
5054449 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.87 80.0 7.21e-01 100.0% 75.4%
3598298 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.87 79.0 7.52e-01 98.1% 88.3%
3704822 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.87 79.0 5.45e-01 100.0% 31.9%
3263635 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.87 79.0 7.29e-01 100.0% 83.1%
3705742 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.87 78.0 7.56e-01 100.0% 87.9%
4013714 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.87 73.0 7.60e-01 94.2% 100.0%
3199611 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.85 79.0 7.30e-01 100.0% 81.2%
4964575 375.1.1.346 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7838 0.83 61.0 6.73e-01 82.7% 100.0%
3445009 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.83 73.0 4.89e-01 100.0% 27.9%
3309343 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.83 72.0 7.14e-01 100.0% 90.9%
4961814 375.1.1.341 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7568 0.81 59.0 6.48e-01 78.8% 100.0%
5028865 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.80 66.0 6.78e-01 94.2% 94.0%
5048721 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.80 70.0 6.57e-01 100.0% 86.2%
3487047 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.79 69.0 6.59e-01 96.2% 90.0%
4028184 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.78 70.0 6.32e-01 100.0% 81.4%
2754621 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.77 66.0 6.14e-01 96.2% 81.8%
4485357 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.77 67.0 6.31e-01 96.2% 81.0%
3781077 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.77 58.0 4.57e-01 80.8% 43.7%
5060010 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 54.0 5.69e-01 82.7% 86.7%
3702281 375.8.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.76 54.0 5.31e-01 80.8% 70.9%
4998373 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 57.0 5.81e-01 84.6% 90.0%
345409 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.73 63.0 5.71e-01 100.0% 75.3%
3408588 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.69 57.0 5.16e-01 94.2% 67.1%
3204334 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.68 50.0 5.13e-01 80.8% 82.0%
4680459 375.1.1.67 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.68 49.0 5.19e-01 80.8% 91.1%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 53.0 4.96e-01 92.3% 69.2%
3930705 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.67 54.0 4.31e-01 88.5% 50.0%
4982529 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 49.0 5.03e-01 82.7% 90.0%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 55.0 3.94e-01 92.3% 36.0%
3218475 4.1.1.390 ↗ beta barrels › SH3 › SH3 › SH3 › PF29855 0.66 54.0 4.17e-01 92.3% 43.3%
5044393 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 48.0 4.59e-01 84.6% 68.3%
3393358 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 54.0 4.40e-01 92.3% 50.5%
3730229 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.65 53.0 4.69e-01 92.3% 62.7%
2796001 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.65 53.0 5.01e-01 96.2% 76.9%
3266046 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.64 49.0 4.77e-01 90.4% 76.7%
4962721 4139.1.1.1 ↗ a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 0.64 45.0 3.43e-01 76.9% 93.8%
4028728 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.64 50.0 4.95e-01 88.5% 83.6%
4364336 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.63 50.0 4.98e-01 90.4% 87.3%
4959885 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.63 51.0 4.36e-01 88.5% 58.8%
4990926 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 48.0 4.91e-01 90.4% 92.0%
5079755 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 49.0 4.85e-01 88.5% 85.5%
4306285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.52e-01 92.3% 67.1%
3497371 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.62 51.0 3.49e-01 90.4% 79.8%
3589900 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 53.0 4.59e-01 100.0% 87.1%
4968829 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 41.0 2.68e-01 90.4% 16.1%
3801858 252.1.1.0 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.62 48.0 4.59e-01 92.3% 73.3%
5029226 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.61 48.0 4.76e-01 88.5% 87.3%
5011152 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 47.0 4.70e-01 86.5% 85.5%
4997648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.61 45.0 4.59e-01 82.7% 88.0%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 46.0 4.40e-01 90.4% 72.7%
None — 0.60 51.0 3.16e-01 100.0% 23.0%
4970648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.59 46.0 4.68e-01 90.4% 96.0%
4949036 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.59 45.0 4.61e-01 88.5% 94.0%
3907024 260.1.1.1 ↗ a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin 0.59 40.0 2.51e-01 73.1% 15.6%
3435896 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 51.0 3.15e-01 100.0% 28.6%
3273270 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 50.0 3.23e-01 100.0% 37.6%
4097208 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 43.0 3.96e-01 84.6% 90.0%
3993689 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 48.0 4.33e-01 100.0% 81.3%
3281618 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.56 45.0 3.72e-01 92.3% 58.0%
4420269 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.55 43.0 3.39e-01 86.5% 42.7%
4304329 376.1.1.32 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var 0.51 41.0 3.23e-01 92.3% 48.7%
3280641 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.50 38.0 3.21e-01 88.5% 56.0%