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translation_elongation_factor_1-alpha
Euk-VirNoumeavirus
translation_elongation_factor_1-alpha__YP_009345567__Noumeavirus__1955558
Identity
- Accession:
- YP_009345567 ↗
- Protein ID:
- translation_elongation_factor_1-alpha
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Noumeavirus
TaxID: 1955558
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 226-305
D2
high
residues 312-409
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03143.24 best | GTP_EFTU_D3 | 39.2 | 1.00e-09 | 100.0% | 96.2% |
| PF22594.3 | GTP-eEF1A_C | 61.8 | 1.00e-16 | 93.9% | 96.0% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.78 | 74.0 | 7.04e-01 | 99.0% | 98.2% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.77 | 72.0 | 6.99e-01 | 99.0% | 99.1% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.76 | 71.0 | 6.91e-01 | 100.0% | 99.1% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 70.0 | 6.76e-01 | 100.0% | 96.4% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 70.0 | 6.97e-01 | 100.0% | 97.1% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 62.0 | 6.39e-01 | 98.0% | 98.9% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.55 | 41.0 | 4.36e-01 | 100.0% | 92.9% |
| 4c97A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 46.0 | 4.19e-01 | 100.0% | 94.8% |
| 1ykwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.50 | 45.0 | 4.09e-01 | 98.0% | 79.4% |
| 4illB01 | 2.40.30.310 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.50 | 44.0 | 4.21e-01 | 98.0% | 94.0% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3663830 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.79 | 75.0 | 7.04e-01 | 100.0% | 97.4% |
| 3786547 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.79 | 75.0 | 7.29e-01 | 100.0% | 98.1% |
| 3578245 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 74.0 | 6.87e-01 | 100.0% | 89.2% |
| 3270372 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 74.0 | 6.94e-01 | 99.0% | 91.3% |
| 3476488 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 74.0 | 7.07e-01 | 99.0% | 97.3% |
| 3292790 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 60.0 | 6.25e-01 | 99.0% | 86.7% |
| 3699413 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 74.0 | 7.09e-01 | 100.0% | 98.2% |
| 4650771 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.78 | 74.0 | 6.94e-01 | 100.0% | 92.2% |
| 4948817 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.78 | 74.0 | 4.77e-01 | 100.0% | 28.5% |
| 3599223 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.78 | 73.0 | 6.97e-01 | 99.0% | 97.3% |
| 3608683 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 74.0 | 6.58e-01 | 100.0% | 82.3% |
| 4932663 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 7.03e-01 | 100.0% | 97.3% |
| 3598857 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.77 | 74.0 | 6.79e-01 | 100.0% | 89.2% |
| 5077659 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.77 | 73.0 | 7.00e-01 | 100.0% | 98.2% |
| 3270538 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.66e-01 | 100.0% | 88.0% |
| 3729551 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.89e-01 | 100.0% | 95.7% |
| 2756432 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.35e-01 | 100.0% | 78.6% |
| 4943569 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 7.13e-01 | 100.0% | 99.0% |
| 3665168 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.75e-01 | 100.0% | 96.7% |
| 4614440 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.84e-01 | 100.0% | 92.2% |
| 3963774 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 72.0 | 6.99e-01 | 98.0% | 100.0% |
| 3594503 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.77 | 73.0 | 6.60e-01 | 100.0% | 85.6% |
| 4097598 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 73.0 | 6.96e-01 | 100.0% | 96.4% |
| 3990253 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 72.0 | 6.45e-01 | 99.0% | 82.2% |
| 5060627 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.77 | 70.0 | 6.87e-01 | 96.9% | 100.0% |
| 4144937 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.76 | 72.0 | 6.68e-01 | 100.0% | 88.3% |
| 4292740 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.76 | 72.0 | 6.21e-01 | 100.0% | 73.1% |
| 4043818 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.76 | 72.0 | 6.68e-01 | 100.0% | 88.3% |
| 4059866 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.76 | 70.0 | 6.57e-01 | 96.9% | 87.8% |
| 4099267 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.75 | 71.0 | 6.22e-01 | 99.0% | 77.0% |
| 140913 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.75 | 70.0 | 7.03e-01 | 100.0% | 99.0% |
| 3502343 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.74 | 69.0 | 6.91e-01 | 99.0% | 99.0% |
| 4288082 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.72 | 57.0 | 5.98e-01 | 82.7% | 100.0% |
| 4948799 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.59 | 35.0 | 2.96e-01 | 94.9% | 36.8% |
| 3699926 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.53 | 47.0 | 4.30e-01 | 100.0% | 93.8% |
| 5051637 | 304.33.1.1 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › P2 | 0.52 | 41.0 | 3.92e-01 | 99.0% | 70.8% |
| 5024024 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.50 | 40.0 | 4.12e-01 | 99.0% | 91.5% |
D3
medium
residues 6-218