←Back to structures

transmembrane_glycoprotein_G

Euk-Vir

Lyssavirus_mokola

transmembrane_glycoprotein_G__YP_142353__Lyssavirus_mokola__12538

Identity

Accession:
YP_142353 ↗
Protein ID:
transmembrane_glycoprotein_G
Kingdom:
euk

Quality

72.4 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Lyssavirus› Lyssavirus_mokola

TaxID: 12538

Cluster

View cluster (70 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-199
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00974.25 best Rhabdo_glycop_FD 80.3 2.00e-22 81.9% 100.0%
D2 medium residues 24-53_276-336
PDB
Domain cluster: rep: glycoprotein__YP_009362242__Mount_Elgon_bat_virus__380434__D26-54_274-340
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24833.2 best Rhabdo_glycop_CD 63.5 3.00e-17 72.5% 51.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4d6wB02 6.10.140.740 Special › Helix non-globular › Helix Hairpins › 0.71 51.0 5.18e-01 76.9% 75.0%
3i3lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.32e-01 96.7% 88.5%
4p5aC00 3.30.1360.170 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.56 48.0 3.69e-01 96.7% 44.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4284121 1008.1.1.59 ↗ alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › Bac_export_2 0.53 45.0 3.42e-01 90.1% 85.4%
D3 medium residues 54-72_207-275
PDB
Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24834.2 best PH_Rhabdo_glycop 107.7 3.10e-31 81.8% 96.0%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.76 69.0 6.74e-01 98.9% 98.9%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.75 68.0 6.69e-01 98.9% 98.9%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 56.0 5.38e-01 90.9% 96.0%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.64 54.0 4.40e-01 96.6% 71.8%
7csoA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.72e-01 92.0% 89.0%
3pp2A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 51.0 4.75e-01 89.8% 97.3%
2napA01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.62 40.0 4.79e-01 94.3% 98.3%
1foeC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.18e-01 92.0% 80.7%
2ijaA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.61 47.0 3.39e-01 87.5% 59.9%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.43e-01 89.8% 94.0%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.28e-01 93.2% 76.9%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 4.17e-01 93.2% 97.1%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.57 45.0 3.68e-01 86.4% 98.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 31.0 3.54e-01 85.2% 75.8%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 43.0 3.68e-01 87.5% 93.4%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.50 34.0 2.85e-01 70.5% 72.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3867284 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 58.0 3.57e-01 93.2% 19.8%
3624046 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 57.0 5.12e-01 92.0% 86.7%
3571958 220.1.1.50 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.67 56.0 5.16e-01 92.0% 82.6%
3270639 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 55.0 5.10e-01 89.8% 93.6%
3702239 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 56.0 4.88e-01 93.2% 95.6%
3869434 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 55.0 4.84e-01 90.9% 78.5%
3389061 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 56.0 5.02e-01 92.0% 89.2%
3894142 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 55.0 4.81e-01 93.2% 89.6%
3933119 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.83e-01 92.0% 95.4%
3777833 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 58.0 4.99e-01 100.0% 95.0%
3522290 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 55.0 4.95e-01 94.3% 88.8%
3992625 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 5.08e-01 90.9% 87.6%
3628059 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 54.0 4.87e-01 93.2% 82.4%
3218911 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 55.0 4.81e-01 94.3% 83.7%
3235806 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.64 54.0 4.62e-01 95.5% 98.0%
3934254 4300.1.1.0 ↗ beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like 0.64 53.0 4.16e-01 89.8% 46.7%
3548260 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 53.0 4.70e-01 89.8% 77.6%
3412723 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.64 54.0 4.67e-01 93.2% 80.0%
3178261 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 53.0 4.75e-01 93.2% 81.6%
3241890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 3.96e-01 85.2% 59.0%
3707991 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 4.24e-01 89.8% 98.7%
3766449 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 52.0 4.85e-01 95.5% 100.0%
3929373 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.61 38.0 4.50e-01 85.2% 91.7%
3553515 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.61 51.0 3.58e-01 94.3% 67.8%
3592269 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 4.43e-01 94.3% 100.0%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 40.0 3.34e-01 84.1% 39.3%
3720028 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.63e-01 93.2% 93.0%
3991351 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.60 49.0 4.25e-01 93.2% 73.1%
3506373 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.60 49.0 4.33e-01 93.2% 82.2%
3406906 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 48.0 4.52e-01 93.2% 89.6%
3529797 220.1.1.68 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_Tiam1 0.59 49.0 4.02e-01 93.2% 78.8%
3841716 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.59 50.0 4.20e-01 94.3% 89.0%
3722745 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.59 46.0 4.77e-01 85.2% 91.3%
3648024 220.1.1.13 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.58 48.0 4.36e-01 93.2% 91.2%
3672735 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.58 35.0 4.02e-01 85.2% 83.1%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 37.0 4.24e-01 85.2% 90.6%
3388895 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.57 46.0 4.37e-01 92.0% 81.8%
3243776 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.56 45.0 4.18e-01 86.4% 83.6%
3936038 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.56 44.0 4.05e-01 85.2% 79.6%
5014589 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.55 41.0 2.70e-01 77.3% 27.8%
3176333 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 34.0 3.82e-01 85.2% 84.6%
3704121 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.53 31.0 3.60e-01 87.5% 84.5%
3336357 3794.1.1.4 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCCA_BT 0.53 42.0 3.49e-01 87.5% 80.0%
3642001 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.52 34.0 3.77e-01 87.5% 84.3%
3942598 2484.1.1.219 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29688 0.51 41.0 3.17e-01 92.0% 77.4%
3254982 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.51 27.0 3.01e-01 96.6% 61.4%
3629455 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.50 44.0 3.50e-01 100.0% 67.4%
D4 medium residues 337-417
PDB
Domain cluster: rep: glycoprotein__YP_007641405__Lyssavirus_duvenhage__38767__D336-396
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24833.2 best Rhabdo_glycop_CD 27.8 3.40e-06 64.2% 43.8%