transport_protein

Euk-Vir

Alcelaphine_gammaherpesvirus_1

transport_protein__NP_065510__Alcelaphine_gammaherpesvirus_1__35252

Identity

80.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Alcelaphine_gammaherpesvirus_1

TaxID: 35252

View cluster (77 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-112

PDB

Domain cluster: rep: transport_protein__YP_004207847__Cricetid_gammaherpesvirus_2__1605972__D1-97

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	99.8	1.70e-28	99.1%	18.0%

D2 medium residues 215-237_294-339

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	25.8	4.00e-06	69.6%	7.6%

D3 medium residues 340-369_423-469

PDB

Domain cluster: rep: DNA_packaging_terminase_subunit_2__YP_010085884__Wood_mouse_herpesvirus__432370__D315-346_400-431

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	57.4	1.10e-15	66.2%	7.3%

D4 medium residues 488-508_617-680

PDB

Domain cluster: rep: terminase_subunit_2__YP_009179297__Elephant_endotheliotropic_herpesvirus_4__548914__D513-536_648-697

D5 medium residues 509-616

PDB

Domain cluster: rep: orf7__YP_009044394__Alcelaphine_gammaherpesvirus_2__138184__D511-616

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01366.24 best	PRTP	129.7	1.50e-37	81.5%	13.7%