←Back to structures
triple_gene_block_3_protein
Euk-VirHippeastrum_latent_virus
triple_gene_block_3_protein__YP_002308450__Hippeastrum_latent_virus__335963
Identity
- Accession:
- YP_002308450 ↗
- Protein ID:
- triple_gene_block_3_protein
- Kingdom:
- euk
Quality
77.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Betaflexiviridae›
Carlavirus›
Hippeastrum_latent_virus
TaxID: 335963
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
rep: triple_block_protein_3__YP_001429588__Potato_virus_P__329164__DFULL
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02495.23 best | TGBp3 | 63.6 | 1.50e-17 | 96.6% | 91.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 49.0 | 4.03e-01 | 86.4% | 48.6% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 48.0 | 3.97e-01 | 86.4% | 50.0% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.60 | 42.0 | 3.61e-01 | 74.6% | 58.8% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.55 | 35.0 | 3.36e-01 | 74.6% | 57.6% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.51 | 40.0 | 2.74e-01 | 83.1% | 71.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3957133 | 7581.1.1.22 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt | 0.72 | 38.0 | 2.51e-01 | 76.3% | 15.2% |
| 5078448 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 53.0 | 4.24e-01 | 86.4% | 48.2% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 52.0 | 4.09e-01 | 86.4% | 44.2% |
| 3296120 | 3922.1.1.126 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › XH | 0.61 | 38.0 | 3.15e-01 | 81.4% | 37.0% |
| 3330811 | 101.1.1.339 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › XH | 0.57 | 38.0 | 3.16e-01 | 78.0% | 40.0% |
| 3808463 | 859.1.1.4 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG13 | 0.54 | 47.0 | 3.11e-01 | 94.9% | 75.4% |
| 5027879 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.53 | 38.0 | 3.46e-01 | 74.6% | 60.0% |
| 4670438 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.52 | 38.0 | 3.86e-01 | 76.3% | 78.0% |