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triple_gene_block_protein_2
Euk-VirMelon_yellowing-associated_virus
triple_gene_block_protein_2__YP_009505628__Melon_yellowing-associated_virus__255255
Identity
- Accession:
- YP_009505628 ↗
- Protein ID:
- triple_gene_block_protein_2
- Kingdom:
- euk
Quality
74.7
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Betaflexiviridae›
Carlavirus›
Melon_yellowing-associated_virus
TaxID: 255255
Cluster
View cluster (82 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-93
Domain cluster:
rep: Second_triple_gene_block_gene__NP_612612__Beet_virus_Q__71972__D34-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01307.23 best | Plant_vir_prot | 52.6 | 6.50e-14 | 100.0% | 68.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.54 | 37.0 | 2.76e-01 | 98.7% | 26.4% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.52 | 43.0 | 3.68e-01 | 100.0% | 94.1% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 43.0 | 3.88e-01 | 100.0% | 91.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033045 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.55 | 48.0 | 3.07e-01 | 98.7% | 94.2% |
| 3485692 | 611.1.1.0 ↗ | alpha bundles › N-cbl like › Transferrin receptor ectodomain, C-terminal domain › Transferrin receptor ectodomain, C-terminal domain | 0.54 | 45.0 | 3.63e-01 | 100.0% | 56.9% |
| 4969654 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.54 | 44.0 | 3.01e-01 | 90.7% | 74.7% |
| 4109850 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.54 | 45.0 | 3.11e-01 | 100.0% | 56.7% |
| 3620425 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 30.0 | 2.70e-01 | 97.3% | 41.9% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 43.0 | 3.91e-01 | 100.0% | 94.3% |