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triple_gene_block_protein_2
Euk-VirCnidium_virus_X
triple_gene_block_protein_2__YP_010087353__Cnidium_virus_X__2510428
Identity
- Accession:
- YP_010087353 ↗
- Protein ID:
- triple_gene_block_protein_2
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Alphaflexiviridae›
Potexvirus›
Cnidium_virus_X
TaxID: 2510428
Cluster
View cluster (82 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-27_51-101
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.81 | 60.0 | 5.54e-01 | 77.4% | 79.2% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 63.0 | 5.84e-01 | 100.0% | 85.9% |
| 6xwtA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 47.0 | 4.45e-01 | 85.5% | 60.8% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 36.0 | 2.92e-01 | 77.4% | 31.5% |
| 2xmxA01 | 1.20.1440.280 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.57 | 43.0 | 3.33e-01 | 83.9% | 36.4% |
| 3n2oA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 41.0 | 2.61e-01 | 83.9% | 29.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030332 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.82 | 60.0 | 3.74e-01 | 100.0% | 16.5% |
| 3728974 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.72 | 47.0 | 3.52e-01 | 90.3% | 28.3% |
| 3645790 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 44.0 | 3.18e-01 | 83.9% | 25.0% |
| 3635187 | 109.62.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › Ebp1_C | 0.69 | 53.0 | 3.48e-01 | 100.0% | 20.4% |
| 3461257 | 109.4.1.3329 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, TPR_6, TPR_16, TPR_19 | 0.66 | 45.0 | 2.70e-01 | 83.9% | 10.5% |
| 3384464 | 304.127.1.0 ↗ | a+b two layers › Alpha-beta plaits › Notch heterodimerization domain › Notch heterodimerization domain | 0.65 | 42.0 | 3.24e-01 | 95.2% | 31.5% |
| 3686981 | 4992.1.1.5 ↗ | extended segments › RelB-like › RelB-like › RelB-like › Sec66 | 0.62 | 53.0 | 4.06e-01 | 95.2% | 42.1% |
| 4628387 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.61 | 51.0 | 4.52e-01 | 88.7% | 72.9% |
| 3324518 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.59 | 44.0 | 2.82e-01 | 80.6% | 98.1% |
| 3210590 | 304.160.1.3 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › PF28298 | 0.59 | 51.0 | 3.88e-01 | 93.5% | 46.7% |
| None | — | 0.58 | 48.0 | 2.84e-01 | 90.3% | 42.6% | |
| 3731347 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 44.0 | 2.91e-01 | 93.5% | 21.2% |
| 3703892 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 41.0 | 2.90e-01 | 83.9% | 43.4% |