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truncated_P4c

Euk-Vir

Akhmeta_virus

truncated_P4c__YP_010085605__Akhmeta_virus__2200830

Identity

Accession:
YP_010085605 ↗
Protein ID:
truncated_P4c
Kingdom:
euk

Quality

74.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Orthopoxvirus_akhmetapox

TaxID: 2200830

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 240-364
PDB
Domain cluster: rep: P4c_precursor__YP_009480654__Sea_otter_poxvirus__1416741__D279-380
D2 high residues 441-494
PDB
D3 medium residues 16-156
PDB
Domain cluster: rep: MC130L__NP_044081__Molluscum_contagiosum_virus_subtype_1__10280__D3-150
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06086.19 best Pox_A30L_A26L 155.2 2.30e-45 95.0% 66.8%
D4 medium residues 157-229
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06086.19 best Pox_A30L_A26L 44.5 2.00e-11 90.4% 24.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.61 46.0 4.71e-01 94.5% 85.9%
7kx9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 40.0 3.26e-01 97.3% 36.1%
6umqA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.58 36.0 3.14e-01 100.0% 40.0%
1kewA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.57 39.0 3.82e-01 87.7% 63.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 41.0 3.52e-01 100.0% 50.0%
3b8mC02 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 38.0 3.37e-01 100.0% 49.0%
2qtsA04 1.10.287.820 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Acid-sensing ion channel domain 0.56 37.0 3.58e-01 95.9% 59.5%
3fhnA01 6.10.280.210 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A 0.55 43.0 3.27e-01 86.3% 39.7%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 46.0 3.77e-01 98.6% 69.8%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 42.0 3.78e-01 86.3% 89.2%
6ghfB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 44.0 3.82e-01 98.6% 75.8%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 41.0 3.68e-01 100.0% 61.2%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 40.0 3.82e-01 82.2% 91.7%
2o5rA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 39.0 3.68e-01 83.6% 70.7%
1wpwA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.52 44.0 2.92e-01 100.0% 29.8%
2q5zB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.51 38.0 3.47e-01 100.0% 60.6%
4v19R01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.51 44.0 3.85e-01 97.3% 87.5%
1jvmB00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 42.0 3.84e-01 100.0% 69.0%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 39.0 3.47e-01 86.3% 84.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4889877 7082.1.1.1 ↗ alpha arrays › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › N-terminal domain of viral protein A26 › Pox_A30L_A26L 0.94 72.0 5.02e-01 82.2% 29.0%
3689721 6155.1.1.2 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.61 44.0 3.56e-01 78.1% 48.7%
3952930 604.6.1.28 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PF30641 0.60 46.0 4.19e-01 84.9% 81.0%
3891331 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.59 43.0 3.62e-01 78.1% 59.2%
4585879 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.58 40.0 3.23e-01 72.6% 86.0%
3351688 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 41.0 3.20e-01 100.0% 31.1%
3669784 1079.1.1.12 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › GDT1 0.57 41.0 2.99e-01 75.3% 80.5%
3284612 604.10.1.10 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF30641 0.57 44.0 4.01e-01 83.6% 80.0%
3509201 1008.1.1.1 ↗ alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36_C 0.56 38.0 3.61e-01 100.0% 58.8%
3954514 604.5.1.61 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF30641 0.56 44.0 3.97e-01 84.9% 81.6%
3243229 109.4.1.46 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N 0.55 46.0 3.06e-01 100.0% 23.0%
4890942 2004.1.1.93 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.55 48.0 3.88e-01 100.0% 85.8%
3648998 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.55 43.0 4.07e-01 86.3% 76.7%
5062607 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.55 38.0 3.21e-01 75.3% 92.1%
3254719 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.55 43.0 3.98e-01 86.3% 88.4%
3233324 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 41.0 3.97e-01 84.9% 100.0%
5071458 4156.1.1.0 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.52 45.0 3.70e-01 100.0% 95.0%
3783943 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.52 39.0 3.67e-01 82.2% 90.0%
4059164 6155.1.1.8 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › Pyr4-TMTC 0.52 40.0 3.68e-01 84.9% 81.0%
3903423 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.51 35.0 3.13e-01 100.0% 49.5%
4965651 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.51 39.0 3.09e-01 87.7% 48.2%
3995159 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.50 35.0 3.14e-01 75.3% 56.5%
5017845 632.7.1.67 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › YetF_N 0.50 37.0 3.55e-01 78.1% 81.2%