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trypsin-like_serine_protease-like_protein

Euk-Vir

Oryctes_rhinoceros_nudivirus

trypsin-like_serine_protease-like_protein__YP_002321313__Oryctes_rhinoceros_nudivirus__92521

Identity

Accession:
YP_002321313 ↗
Protein ID:
trypsin-like_serine_protease-like_protein
Kingdom:
euk

Quality

68.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 80-95_107-214
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00089.33 best Trypsin 29.2 1.10e-06 91.1% 45.5%
D2 medium residues 215-339
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00089.33 best Trypsin 32.8 8.70e-08 92.8% 45.9%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5eokA05 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 69.0 5.50e-01 99.2% 47.4%
4f4oC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 75.0 6.96e-01 100.0% 90.9%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 69.0 7.23e-01 100.0% 99.1%
2hlcA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 68.0 6.84e-01 92.0% 88.9%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 63.0 6.57e-01 90.4% 88.9%
2rdlA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 63.0 6.50e-01 90.4% 89.0%
3fzzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 64.0 6.54e-01 90.4% 89.2%
5jpmH01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 67.0 6.50e-01 90.4% 90.4%
3s9cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 63.0 6.46e-01 90.4% 89.2%
1buiA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 66.0 6.66e-01 90.4% 89.7%
1autC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 66.0 6.42e-01 90.4% 90.3%
5brrE01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 65.0 6.35e-01 90.4% 90.3%
2zgcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 65.0 6.51e-01 90.4% 89.7%
1ym0A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 64.0 6.44e-01 88.8% 89.7%
5fcrA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 63.0 6.39e-01 90.4% 89.3%
3beuA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 64.0 6.46e-01 90.4% 89.6%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 62.0 6.35e-01 88.8% 89.3%
1m9uA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 64.0 6.34e-01 90.4% 90.2%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 59.0 6.17e-01 88.8% 91.2%
2olgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 63.0 6.55e-01 90.4% 99.1%
5pabH01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 6.21e-01 90.4% 89.8%
2xxlA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 5.84e-01 89.6% 80.8%
3nxpA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 5.41e-01 90.4% 67.0%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 57.0 6.10e-01 100.0% 100.0%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 65.0 5.06e-01 100.0% 53.3%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 64.0 4.70e-01 100.0% 45.1%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.64 46.0 4.86e-01 92.0% 85.3%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 4.29e-01 86.4% 89.9%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 46.0 3.88e-01 92.8% 74.0%
7v6bA01 3.30.160.380 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain 0.52 30.0 3.14e-01 79.2% 61.4%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3500739 1.1.7.66 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Trypsin 0.85 58.0 6.61e-01 75.2% 91.6%
3401816 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 78.0 6.12e-01 100.0% 53.9%
None 0.83 76.0 5.82e-01 99.2% 46.5%
3246847 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.83 60.0 5.10e-01 100.0% 48.2%
3389000 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 76.0 5.94e-01 100.0% 50.4%
1310585 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.82 66.0 5.30e-01 100.0% 46.3%
3535535 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 76.0 5.95e-01 100.0% 50.2%
4681800 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 72.0 5.79e-01 100.0% 52.3%
3408067 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 77.0 5.83e-01 100.0% 51.5%
3880689 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 74.0 5.88e-01 100.0% 51.7%
3896593 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 74.0 7.14e-01 100.0% 86.3%
3527303 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 77.0 5.84e-01 100.0% 48.7%
3395929 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 73.0 5.84e-01 100.0% 52.4%
4652006 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 76.0 5.72e-01 100.0% 45.3%
4557948 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 75.0 5.72e-01 100.0% 46.4%
4241887 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 76.0 5.80e-01 100.0% 47.2%
3565221 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 76.0 5.83e-01 100.0% 50.0%
4251394 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 76.0 5.78e-01 100.0% 47.9%
3411245 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 75.0 5.66e-01 98.4% 47.0%
3017386 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.80 76.0 5.89e-01 100.0% 51.6%
3414189 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 76.0 5.72e-01 100.0% 45.8%
3890483 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.88e-01 100.0% 50.6%
3390372 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 71.0 5.58e-01 100.0% 48.3%
3393791 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 72.0 5.58e-01 100.0% 47.2%
3932135 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.48e-01 99.2% 48.5%
3411238 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 76.0 5.67e-01 100.0% 48.2%
3884140 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 76.0 5.75e-01 100.0% 46.7%
4250509 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 76.0 5.67e-01 100.0% 46.4%
3501756 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 74.0 5.55e-01 97.6% 43.9%
3568406 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.75e-01 100.0% 47.5%
3415234 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.76e-01 100.0% 50.6%
3416162 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.76e-01 100.0% 49.4%
3413957 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.81e-01 100.0% 50.6%
3890063 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.74e-01 100.0% 47.2%
3408725 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.75e-01 100.0% 50.0%
3412488 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 75.0 5.60e-01 100.0% 45.0%
3397446 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 75.0 5.78e-01 100.0% 49.6%
3513910 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 75.0 5.71e-01 100.0% 47.9%
3515916 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 73.0 6.56e-01 100.0% 73.9%
3754112 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.71e-01 100.0% 50.0%
3233235 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.55e-01 100.0% 45.4%
3888932 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.73e-01 100.0% 48.4%
3398931 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.75e-01 100.0% 49.4%
3389148 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 72.0 5.54e-01 99.2% 46.5%
3405914 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.60e-01 100.0% 46.9%
3400042 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 72.0 5.72e-01 100.0% 51.5%
3411403 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.57e-01 99.2% 46.9%
3497558 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.72e-01 100.0% 51.0%
3399384 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 73.0 5.68e-01 99.2% 50.8%
3415802 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 72.0 5.43e-01 100.0% 43.6%
3399264 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.61e-01 100.0% 48.8%
3397483 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 74.0 5.55e-01 100.0% 46.8%
3993931 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 73.0 5.83e-01 100.0% 56.2%
3860909 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.64e-01 100.0% 50.4%
3394133 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 74.0 5.95e-01 100.0% 55.6%
None 0.78 73.0 5.68e-01 100.0% 51.8%
3855145 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 74.0 5.56e-01 100.0% 49.1%
3857329 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 73.0 5.81e-01 100.0% 53.2%
3479686 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 73.0 5.47e-01 100.0% 45.6%
4274760 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 73.0 5.49e-01 99.2% 45.5%
3555476 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 73.0 5.69e-01 100.0% 50.0%
3506614 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 73.0 5.51e-01 100.0% 45.4%
3394379 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.62e-01 98.4% 50.6%
3517452 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 72.0 6.47e-01 100.0% 74.5%
3390498 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 72.0 5.58e-01 100.0% 48.8%
3413093 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 73.0 5.61e-01 100.0% 49.4%
3525486 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 70.0 5.60e-01 99.2% 52.2%
3390369 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 72.0 5.57e-01 100.0% 49.6%
3843200 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 73.0 5.60e-01 100.0% 48.3%
1173209 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 72.0 5.54e-01 99.2% 48.3%
3407221 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 69.0 5.52e-01 100.0% 51.1%
3902537 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 72.0 5.59e-01 99.2% 51.0%
3416167 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 5.46e-01 100.0% 49.2%
3394788 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 64.0 5.02e-01 100.0% 45.8%
3399946 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 69.0 5.43e-01 100.0% 49.6%
3388883 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 69.0 5.42e-01 100.0% 50.0%
3403363 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 69.0 5.29e-01 100.0% 45.7%
3507580 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 5.87e-01 99.2% 72.2%
3411541 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 69.0 5.22e-01 100.0% 43.6%
3409561 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 5.60e-01 98.4% 53.9%
3475207 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 70.0 5.08e-01 100.0% 51.4%
3546733 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 71.0 5.49e-01 100.0% 50.4%
4125357 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 66.0 5.25e-01 97.6% 50.0%
3616905 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 67.0 5.07e-01 100.0% 43.6%
2163689 1.1.5.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin,Thrombin_light 0.73 68.0 4.98e-01 100.0% 43.5%
3504078 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 67.0 5.16e-01 99.2% 47.5%
3400560 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 65.0 5.06e-01 100.0% 48.0%
3409888 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 67.0 5.17e-01 100.0% 48.1%
1309427 1.1.5.13 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.71 66.0 5.18e-01 100.0% 55.2%
3878780 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 52.0 4.58e-01 87.2% 53.0%
3752007 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 64.0 5.10e-01 100.0% 51.9%
3723374 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 64.0 4.61e-01 100.0% 48.5%
3671897 221.1.1.111 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiq_DUF_assoc 0.51 28.0 3.24e-01 86.4% 75.3%