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tryptophan_repeat_gene_family

Euk-Vir

Mythimna_separata_entomopoxvirus_L

tryptophan_repeat_gene_family__YP_008003570__Mythimna_separata_entomopoxvirus_L__1293572

Identity

Accession:
YP_008003570 ↗
Protein ID:
tryptophan_repeat_gene_family
Kingdom:
euk

Quality

81.4 mean pLDDT

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-99
PDB
Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217
D2 medium residues 100-171
PDB
D3 medium residues 172-260
PDB
Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cnyA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 56.0 3.95e-01 100.0% 61.2%
8tbxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 3.83e-01 96.6% 68.0%
3ivrA00 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.57 46.0 3.05e-01 89.9% 75.4%
2we8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 44.0 3.74e-01 85.4% 85.2%
5z9sB01 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.56 49.0 3.36e-01 100.0% 55.5%
4yt2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 45.0 3.56e-01 91.0% 81.4%
7jw2A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 41.0 3.24e-01 80.9% 56.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3830984 207.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 0.61 52.0 3.82e-01 100.0% 66.7%
4391382 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.57 49.0 3.68e-01 100.0% 63.7%
4183146 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.56 47.0 3.12e-01 96.6% 29.3%
3212404 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 48.0 3.56e-01 100.0% 52.2%