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tryptophan_repeat_gene_family

Euk-Vir

Choristoneura_biennis_entomopoxvirus

tryptophan_repeat_gene_family__YP_008004095__Choristoneura_biennis_entomopoxvirus__10288

Identity

Accession:
YP_008004095 ↗
Protein ID:
tryptophan_repeat_gene_family
Kingdom:
euk

Quality

89.5 mean pLDDT

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-243
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vwaA03 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 51.0 4.73e-01 79.4% 96.6%
4r0zA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 57.0 4.43e-01 99.2% 73.8%
2xpiD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 46.0 3.66e-01 97.1% 85.7%
8g0lB01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 47.0 4.09e-01 100.0% 91.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743991 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.57 48.0 4.00e-01 90.1% 67.2%
3717332 109.4.1.888 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N 0.57 51.0 4.23e-01 97.5% 62.3%
3219544 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 43.0 4.09e-01 84.0% 95.3%
4391382 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.51 29.0 2.97e-01 70.4% 53.9%