tryptophan_repeat_gene_family

Euk-Vir

Choristoneura_biennis_entomopoxvirus

tryptophan_repeat_gene_family__YP_008004109__Choristoneura_biennis_entomopoxvirus__10288

Identity

84.5 mean pLDDT

View cluster (13 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-99

PDB

Domain cluster: rep: tryptophan_repeat_gene_family__YP_008004419__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D1-81

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cs7A00	3.10.50.90	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.57	30.0	3.74e-01	89.6%	87.3%
2lleA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.57	39.0	3.03e-01	71.9%	44.0%
4j9jA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.56	40.0	3.10e-01	75.0%	42.7%
1b3qA04	2.40.50.180	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4	0.55	28.0	3.36e-01	86.5%	73.0%
8gpsA01	1.25.60.10	Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like	0.54	43.0	4.28e-01	90.6%	84.8%
2r8rA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	38.0	3.01e-01	80.2%	83.3%
3h09B02	2.160.20.20	Mainly Beta › 3 Solenoid › Pectate Lyase C-like ›	0.50	44.0	2.83e-01	100.0%	38.8%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4929483	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.53	31.0	2.89e-01	78.1%	45.0%
3903932	226.1.1.1 ↗	a+b two layers › POZ domain › POZ domain › POZ domain › BTB	0.53	46.0	4.08e-01	97.9%	94.5%
4405603	3239.1.1.1 ↗	alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1	0.53	39.0	2.83e-01	79.2%	86.4%
4585871	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	42.0	3.88e-01	92.7%	65.6%
3339576	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	41.0	3.51e-01	86.5%	67.1%
5022727	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.52	42.0	3.74e-01	91.7%	93.3%
4430285	7516.1.1.5 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD	0.50	34.0	2.66e-01	70.8%	70.9%

D2 medium residues 106-168

PDB

Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217

D3 medium residues 169-230

PDB

Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1lkvX02	1.10.220.30	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain	0.60	41.0	3.34e-01	72.6%	45.5%
3ivrA00	3.40.50.12780	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain	0.60	50.0	3.14e-01	100.0%	16.8%
3cu2A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.59	51.0	3.51e-01	100.0%	46.2%
4d7rA01	1.10.220.20	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 ›	0.59	45.0	4.15e-01	83.9%	92.7%
4agsA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.55	41.0	3.36e-01	87.1%	88.9%
4hreA03	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.53	40.0	3.69e-01	85.5%	87.4%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3862804	109.3.1.96 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4	0.65	55.0	3.43e-01	100.0%	23.3%
3282108	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.63	53.0	4.12e-01	100.0%	91.6%
3368785	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.62	49.0	4.16e-01	91.9%	69.6%