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ubiquitin_E3_ligase_ICP0
Euk-VirBubaline_alphaherpesvirus_1
ubiquitin_E3_ligase_ICP0__YP_009664681__Bubaline_alphaherpesvirus_1__202910
Identity
- Accession:
- YP_009664681 ↗
- Protein ID:
- ubiquitin_E3_ligase_ICP0
- Kingdom:
- euk
Quality
46.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Bubaline_alphaherpesvirus_1
TaxID: 202910
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-79
Domain cluster:
rep: ubiquitin_E3_ligase_ICP0__YP_068377__Suid_alphaherpesvirus_1__10345__D13-62
Pfam (6)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13920.13 best | zf-C3HC4_3 | 28.3 | 1.70e-06 | 70.0% | 65.3% |
| PF13639.13 | zf-RING_2 | 34.7 | 2.40e-08 | 60.0% | 63.6% |
| PF00097.32 | zf-C3HC4 | 36.1 | 6.40e-09 | 58.0% | 70.0% |
| PF12678.14 | zf-rbx1 | 33.7 | 4.90e-08 | 58.0% | 45.5% |
| PF13923.13 | zf-C3HC4_2 | 32.7 | 7.30e-08 | 58.0% | 67.5% |
| PF13445.13 | zf-RING_UBOX | 26.3 | 8.20e-06 | 54.0% | 66.7% |
D2
medium
residues 152-259
Domain cluster:
rep: ubiquitin_E3_ligase_ICP0__YP_002333544__Equid_alphaherpesvirus_9__55744__D120-192