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ubiquitin_E3_ligase_ICP0
Euk-VirEquid_alphaherpesvirus_1
ubiquitin_E3_ligase_ICP0__YP_053107__Equid_alphaherpesvirus_1__10326
Identity
- Accession:
- YP_053107 ↗
- Protein ID:
- ubiquitin_E3_ligase_ICP0
- Kingdom:
- euk
Quality
48.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_1
TaxID: 10326
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-67
Domain cluster:
rep: ubiquitin_E3_ligase_ICP0__YP_068377__Suid_alphaherpesvirus_1__10345__D13-62
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13920.13 best | zf-C3HC4_3 | 33.5 | 3.90e-08 | 72.0% | 69.4% |
| PF13639.13 | zf-RING_2 | 37.1 | 4.10e-09 | 60.0% | 61.4% |
| PF12678.14 | zf-rbx1 | 32.6 | 1.10e-07 | 58.0% | 45.5% |
| PF13923.13 | zf-C3HC4_2 | 34.8 | 1.60e-08 | 58.0% | 67.5% |
| PF00097.32 | zf-C3HC4 | 38.4 | 1.30e-09 | 58.0% | 70.0% |
D2
high
residues 111-193
Domain cluster:
rep: ubiquitin_E3_ligase_ICP0__YP_002333544__Equid_alphaherpesvirus_9__55744__D120-192