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uncharacterized_Bro-N_domain-containing_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
uncharacterized_Bro-N_domain-containing_protein__YP_003986485__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986485 ↗
- Protein ID:
- uncharacterized_Bro-N_domain-containing_protein
- Kingdom:
- euk
Quality
84.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-84
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 33.7 | 6.40e-08 | 81.9% | 60.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 37.0 | 3.28e-01 | 73.5% | 70.7% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.48e-01 | 97.6% | 54.8% |
| 4kx7A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.50 | 42.0 | 3.10e-01 | 96.4% | 51.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3515810 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 47.0 | 3.13e-01 | 79.5% | 50.2% |
| None | — | 0.59 | 40.0 | 2.69e-01 | 71.1% | 73.5% | |
| 4928071 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.57 | 41.0 | 2.86e-01 | 77.1% | 60.3% |
| 3656865 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.55 | 42.0 | 2.81e-01 | 84.3% | 38.1% |
| 3228315 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.54 | 45.0 | 3.41e-01 | 92.8% | 47.8% |
| 4971949 | 7516.1.1.10 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC | 0.54 | 38.0 | 2.88e-01 | 75.9% | 71.1% |
| 3733685 | 109.21.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 | 0.53 | 44.0 | 2.64e-01 | 97.6% | 60.9% |
| 3600699 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.52 | 46.0 | 3.50e-01 | 97.6% | 45.8% |
| 3176815 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.51 | 43.0 | 3.17e-01 | 91.6% | 80.7% |
| 3675566 | 207.1.1.151 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_4, LRR_8 | 0.50 | 36.0 | 2.75e-01 | 77.1% | 94.9% |