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uncharacterized_Bro-N_domain-containing_protein
Euk-VirAcanthamoeba_polyphaga_mimivirus
uncharacterized_Bro-N_domain-containing_protein__YP_003986616__Acanthamoeba_polyphaga_mimivirus__212035
Identity
- Accession:
- YP_003986616 ↗
- Protein ID:
- uncharacterized_Bro-N_domain-containing_protein
- Kingdom:
- euk
Quality
66.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Mimivirus›
Acanthamoeba_polyphaga_mimivirus
TaxID: 212035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 63-140
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 39.4 | 1.10e-09 | 100.0% | 77.1% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.67 | 51.0 | 4.74e-01 | 100.0% | 65.7% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.64 | 56.0 | 5.10e-01 | 100.0% | 75.5% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 44.0 | 3.26e-01 | 87.2% | 35.5% |
| 6kgzA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 40.0 | 3.45e-01 | 80.8% | 84.3% |
| 3zmdA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.16e-01 | 91.0% | 39.9% |
| 3lfkD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.26e-01 | 85.9% | 50.0% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.07e-01 | 85.9% | 37.5% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.52 | 45.0 | 3.40e-01 | 100.0% | 88.1% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.02e-01 | 80.8% | 43.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.87 | 72.0 | 6.29e-01 | 100.0% | 61.8% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.84 | 71.0 | 6.49e-01 | 100.0% | 70.0% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.82 | 70.0 | 6.27e-01 | 100.0% | 67.0% |
| 3529465 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.69 | 62.0 | 5.63e-01 | 100.0% | 80.0% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.69 | 61.0 | 5.41e-01 | 100.0% | 73.9% |
| 4032453 | 101.1.9.78 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA | 0.68 | 61.0 | 5.73e-01 | 100.0% | 83.2% |
| 3400698 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.67 | 59.0 | 5.38e-01 | 100.0% | 78.1% |
| 3525074 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.65 | 57.0 | 5.50e-01 | 98.7% | 86.7% |
| 4003595 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.64 | 57.0 | 4.86e-01 | 100.0% | 61.2% |
| 4254112 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.63 | 46.0 | 4.39e-01 | 100.0% | 66.7% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.61 | 43.0 | 3.64e-01 | 100.0% | 42.1% |
| 4797542 | 101.1.9.25 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › INI1_DNA-bd | 0.61 | 51.0 | 5.00e-01 | 96.2% | 86.2% |
| 3948248 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 42.0 | 4.46e-01 | 89.7% | 87.7% |
| 3214527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 51.0 | 4.41e-01 | 100.0% | 71.2% |
| 3422463 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.57 | 43.0 | 3.97e-01 | 83.3% | 70.5% |
| 4961822 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.76e-01 | 82.1% | 63.3% |
| 4995042 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.54 | 45.0 | 4.43e-01 | 92.3% | 98.8% |
| 3675663 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.54 | 42.0 | 3.52e-01 | 87.2% | 55.0% |
| 4961841 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.52 | 41.0 | 3.60e-01 | 91.0% | 60.8% |
| 3662349 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.52 | 41.0 | 3.59e-01 | 87.2% | 65.8% |
| 4025377 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 38.0 | 3.75e-01 | 79.5% | 74.1% |
| 3324054 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.52 | 41.0 | 2.71e-01 | 91.0% | 18.9% |
| 9236 | 2003.1.2.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.99e-01 | 89.7% | 31.3% |
| None | — | 0.51 | 40.0 | 2.62e-01 | 89.7% | 18.7% |
D2
medium
residues 141-196