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uncharacterized_peptidase_C1-like_protein

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

uncharacterized_peptidase_C1-like_protein__YP_003986985__Acanthamoeba_polyphaga_mimivirus__212035

Identity

Accession:
YP_003986985 ↗
Protein ID:
uncharacterized_peptidase_C1-like_protein
Kingdom:
euk

Quality

78.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-35_62-172
PDB
D2 medium residues 36-61_173-280
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00112.30 best Peptidase_C1 48.5 1.70e-12 84.3% 37.7%
PF13529.14 Peptidase_C39_2 26.4 1.10e-05 80.6% 32.5%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oisB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.84 77.0 5.87e-01 94.8% 87.6%
1xkgA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.77 70.0 5.24e-01 94.8% 72.5%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.76 61.0 5.19e-01 82.8% 79.0%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.76 64.0 4.45e-01 88.1% 92.0%
2wbfX00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.75 68.0 5.36e-01 97.0% 99.2%
6zq3A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.75 63.0 5.34e-01 88.1% 100.0%
5fpwA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 68.0 5.13e-01 96.3% 79.1%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 63.0 4.38e-01 88.8% 92.1%
1deuB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 66.0 5.16e-01 94.8% 92.7%
5egwA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 66.0 4.70e-01 94.8% 59.8%
1act000 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 66.0 5.47e-01 94.8% 100.0%
3pw3D00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 63.0 4.50e-01 90.3% 94.6%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 66.0 5.36e-01 94.8% 99.1%
3iutA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.72 65.0 5.45e-01 94.8% 100.0%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 65.0 5.26e-01 100.0% 96.7%
3bb7A01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.69 47.0 4.25e-01 91.0% 53.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 38.0 4.78e-01 91.8% 93.8%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.64 41.0 4.88e-01 77.6% 96.7%
3ervA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 52.0 4.56e-01 92.5% 99.5%
1jelP00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.56 28.0 3.35e-01 79.9% 71.8%
3bv8A00 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.54 30.0 3.70e-01 100.0% 85.9%
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.53 31.0 3.46e-01 80.6% 72.2%
2vldB01 2.70.180.20 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › 0.52 39.0 4.13e-01 79.1% 90.7%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.34e-01 78.4% 90.0%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5064725 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.85 74.0 5.54e-01 90.3% 78.5%
4960361 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.82 79.0 5.95e-01 100.0% 89.3%
3723538 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.80 74.0 5.44e-01 96.3% 90.4%
3579978 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.80 57.0 5.91e-01 73.9% 77.6%
3803520 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 61.0 6.42e-01 78.4% 93.3%
3996394 4.8.1.39 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_C1 0.79 52.0 6.33e-01 70.9% 100.0%
5032667 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.78 71.0 5.19e-01 94.8% 78.1%
3620332 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.78 69.0 4.93e-01 92.5% 75.8%
3519107 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.78 71.0 5.09e-01 94.8% 78.7%
3277753 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.78 74.0 5.83e-01 100.0% 87.8%
5034502 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.78 70.0 5.73e-01 94.0% 98.7%
3510485 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 70.0 5.07e-01 94.0% 80.0%
3242975 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 70.0 5.04e-01 94.8% 72.6%
4047160 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 68.0 5.49e-01 92.5% 88.3%
None 0.77 51.0 6.18e-01 70.1% 100.0%
3317119 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 70.0 5.52e-01 94.8% 90.0%
3229331 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 70.0 5.60e-01 95.5% 90.2%
3479869 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.77 70.0 5.09e-01 94.8% 78.7%
4855772 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 56.0 5.36e-01 78.4% 65.4%
3261680 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 69.0 5.24e-01 94.8% 78.5%
4021473 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.77 69.0 5.49e-01 94.8% 92.0%
3489030 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 69.0 5.13e-01 94.8% 79.7%
3656345 219.1.1.2 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 0.77 69.0 4.99e-01 94.8% 75.9%
2793930 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.77 69.0 5.13e-01 94.8% 78.9%
4377695 219.1.1.2 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 0.76 69.0 5.09e-01 94.8% 80.3%
4978305 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.76 69.0 5.17e-01 94.8% 74.9%
3250297 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.76 69.0 5.23e-01 94.8% 83.2%
3795430 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.76 67.0 5.40e-01 93.3% 86.8%
3433434 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.76 64.0 5.34e-01 88.1% 95.8%
None 0.76 66.0 5.10e-01 91.8% 76.0%
3422428 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.75 66.0 5.43e-01 91.8% 99.1%
3505458 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 68.0 5.33e-01 94.8% 86.9%
3567565 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 67.0 5.04e-01 92.5% 73.4%
3486878 219.1.1.110 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 0.75 68.0 5.01e-01 94.8% 75.5%
3260560 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 70.0 5.46e-01 98.5% 90.6%
2076995 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 67.0 5.43e-01 93.3% 94.8%
3497089 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.75 68.0 5.05e-01 94.8% 77.7%
3319851 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 58.0 4.86e-01 79.1% 60.0%
4448672 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.75 67.0 4.96e-01 93.3% 71.8%
3470973 219.1.1.110 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 0.75 67.0 5.34e-01 93.3% 88.1%
4026925 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 70.0 5.23e-01 100.0% 91.3%
4030613 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.75 67.0 5.30e-01 96.3% 99.2%
3629255 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.75 67.0 4.99e-01 94.0% 69.5%
3806552 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 57.0 5.25e-01 79.9% 85.3%
3488949 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 66.0 5.36e-01 93.3% 89.8%
3421122 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 68.0 5.41e-01 96.3% 91.2%
3836765 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 66.0 5.34e-01 92.5% 88.0%
4415790 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 69.0 5.33e-01 100.0% 94.7%
3216614 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 67.0 4.90e-01 94.8% 74.5%
3481577 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 67.0 5.40e-01 94.8% 90.4%
3252600 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 65.0 5.47e-01 91.0% 100.0%
3993778 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 66.0 5.28e-01 93.3% 78.0%
3940173 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 66.0 5.39e-01 94.0% 91.5%
3273778 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 66.0 4.82e-01 93.3% 69.8%
3668220 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 66.0 4.96e-01 93.3% 73.8%
3516722 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 67.0 4.21e-01 94.8% 39.0%
3679431 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 66.0 4.96e-01 94.0% 72.7%
4029993 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 69.0 4.77e-01 100.0% 65.8%
3884055 219.1.1.110 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 0.74 66.0 5.29e-01 94.8% 86.3%
3661135 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 67.0 4.88e-01 94.8% 67.1%
3807595 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.74 66.0 4.78e-01 94.0% 63.8%
3793700 219.1.1.110 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 0.74 58.0 5.41e-01 80.6% 68.1%
3331216 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.74 58.0 5.54e-01 80.6% 75.3%
3574352 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.74 57.0 6.32e-01 80.6% 99.1%
3891882 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.73 66.0 5.02e-01 94.8% 84.9%
3401763 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.73 65.0 5.25e-01 93.3% 89.1%
3832249 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 61.0 4.72e-01 87.3% 90.9%
4268173 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 66.0 4.68e-01 94.8% 59.5%
4391291 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.73 66.0 5.28e-01 94.8% 92.1%
4127832 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 66.0 4.93e-01 94.8% 73.7%
3699843 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.73 65.0 4.86e-01 94.8% 69.7%
None 0.72 66.0 4.82e-01 96.3% 68.5%
3830240 109.4.1.84 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › API5 0.72 61.0 3.96e-01 90.3% 40.9%
3803751 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.72 62.0 5.21e-01 91.0% 99.5%
4429823 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 62.0 4.62e-01 91.8% 65.0%
3437797 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 62.0 4.91e-01 91.0% 81.6%
None 0.70 66.0 4.76e-01 100.0% 67.9%
3650468 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.68 60.0 5.67e-01 93.3% 93.8%
3803752 219.1.1.124 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF29469 0.67 55.0 4.33e-01 85.8% 88.5%
3495032 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.65 62.0 5.18e-01 100.0% 96.7%
3252749 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.64 55.0 4.35e-01 89.6% 100.0%
3643302 219.1.1.78 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 0.63 57.0 4.73e-01 94.8% 99.1%
5012604 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.63 56.0 4.78e-01 94.8% 98.1%
3710887 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.62 59.0 5.02e-01 100.0% 87.2%
3724767 219.1.1.4 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.61 50.0 3.69e-01 88.1% 66.5%
3304778 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.61 49.0 4.09e-01 85.1% 61.8%