uncovered_polypeptide_polyprotein_2ab

Euk-Vir

Artemisia_virus_A

uncovered_polypeptide_polyprotein_2ab__YP_006331061_401-955__Artemisia_virus_A__1133751

Identity

85.8 mean pLDDT

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 41-125_240-262_352-384

PDB

Domain cluster: rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D698-776_892-917

D2 medium residues 126-239_263-289_323-351

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	22.6	6.80e-05	68.8%	27.3%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3aq5A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	33.0	3.89e-01	86.5%	89.7%
1dlwA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	32.0	3.85e-01	85.9%	88.8%
2bk9A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.52	38.0	3.98e-01	88.2%	83.7%
3cucA00	1.10.3290.10	Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain	0.51	40.0	3.50e-01	82.4%	86.6%
1hbgA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.50	37.0	3.98e-01	88.8%	87.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3945769	3759.1.1.1 ↗	alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm	0.52	34.0	3.82e-01	85.3%	84.4%

D3 medium residues 290-322_385-467

PDB

Domain cluster: rep: polyprotein_P2a-P2b__YP_009140472__Cymbidium_chlorotic_mosaic_virus__1602124__D662-698_766-823

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	71.5	1.00e-19	72.4%	18.3%