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uncovered_polypeptide_polyprotein
Euk-VirPestivirus_giraffe-1_H138
uncovered_polypeptide_polyprotein__NP_620053_0-687__Pestivirus_giraffe-1_H138__119222
Identity
- Accession:
- NP_620053_0-687 ↗
- Protein ID:
- uncovered_polypeptide_polyprotein
- Kingdom:
- euk
Quality
53.0
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Pestivirus›
Pestivirus_giraffe-1_H138
TaxID: 119222
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-169
D2
medium
residues 253-426
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dw4B00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.95 | 85.0 | 8.86e-01 | 92.5% | 98.2% |
| 3t0oA00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.72 | 59.0 | 5.67e-01 | 85.6% | 98.0% |
| 1j1fA00 | 3.90.730.10 | Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like | 0.70 | 57.0 | 5.59e-01 | 85.6% | 98.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185696 | 280.1.1.0 ↗ | a+b two layers › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease Rh-like | 0.95 | 85.0 | 8.86e-01 | 92.5% | 99.4% |
| 3389166 | 280.1.1.1 ↗ | a+b two layers › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease_T2 | 0.73 | 60.0 | 5.48e-01 | 85.6% | 97.7% |
| 6545 | 280.1.1.1 ↗ | a+b two layers › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease_T2 | 0.69 | 56.0 | 5.50e-01 | 86.2% | 99.5% |
| 4264650 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.54 | 27.0 | 2.98e-01 | 82.8% | 57.1% |
D3
medium
residues 636-687