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uncovered_polypeptide_polyprotein
Euk-VirCutthroat_trout_virus
uncovered_polypeptide_polyprotein__YP_004464917_245-428__Cutthroat_trout_virus__1016879
Identity
- Accession:
- YP_004464917_245-428 ↗
- Protein ID:
- uncovered_polypeptide_polyprotein
- Kingdom:
- euk
Quality
70.1
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Hepelivirales›
Hepeviridae›
Piscihepevirus›
Cutthroat_trout_virus
TaxID: 1016879
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-170
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 37.0 | 4.08e-01 | 81.0% | 69.8% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.63 | 37.0 | 4.24e-01 | 74.6% | 78.7% |
| 7yugA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.61 | 38.0 | 4.06e-01 | 71.4% | 69.9% |
| 1e6vB02 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.58 | 41.0 | 3.14e-01 | 73.8% | 85.5% |
| 1yiqA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.56 | 39.0 | 4.21e-01 | 71.4% | 87.7% |
| 4xcgA02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.55 | 38.0 | 4.01e-01 | 70.6% | 84.1% |
| 4it1B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 40.0 | 3.80e-01 | 77.0% | 77.8% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 40.0 | 3.42e-01 | 80.2% | 98.0% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 35.0 | 3.60e-01 | 80.2% | 72.7% |
| 7cafA01 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.51 | 37.0 | 2.89e-01 | 76.2% | 41.2% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 36.0 | 3.74e-01 | 84.1% | 78.6% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.50 | 46.0 | 3.60e-01 | 97.6% | 81.7% |
| 4l7nA01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.50 | 39.0 | 3.72e-01 | 81.0% | 73.4% |
| 3bjoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 29.0 | 3.15e-01 | 71.4% | 68.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1837963 | 1038.1.1.2 ↗ | alpha complex topology › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain › PROCN | 0.73 | 44.0 | 4.34e-01 | 81.7% | 57.1% |
| 3690513 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 48.0 | 4.76e-01 | 77.0% | 70.7% |
| 4271212 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 45.0 | 4.57e-01 | 75.4% | 76.4% |
| 4959254 | 4953.1.1.41 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › DUF6789 | 0.60 | 42.0 | 4.04e-01 | 72.2% | 90.0% |
| 3780998 | 109.4.1.2405 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31236 | 0.60 | 47.0 | 3.41e-01 | 83.3% | 87.6% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 39.0 | 4.15e-01 | 71.4% | 75.7% |
| 4887090 | 3834.1.1.1 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA_TcB_BD | 0.58 | 44.0 | 3.14e-01 | 78.6% | 30.8% |
| 3399224 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 45.0 | 3.96e-01 | 81.7% | 65.0% |
| 4024126 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.57 | 45.0 | 3.66e-01 | 94.4% | 45.2% |
| 3497542 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.54 | 44.0 | 3.18e-01 | 88.9% | 69.3% |
| 4931846 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.53 | 43.0 | 2.82e-01 | 84.1% | 76.1% |
| 3662150 | 371.1.1.0 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 | 0.52 | 40.0 | 3.96e-01 | 81.0% | 86.9% |
| 4277306 | 4974.1.1.0 ↗ | alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain › CRISPR-Cas system RNase C2c2 first helical domain | 0.51 | 36.0 | 3.41e-01 | 72.2% | 82.1% |