←Back to structures

uncovered_polypeptide_truncated_polyprotein

Euk-Vir

Quang_Binh_virus

uncovered_polypeptide_truncated_polyprotein__YP_006491221_0-704__Quang_Binh_virus__643132

Identity

Protein ID:
uncovered_polypeptide_truncated_polyprotein
Kingdom:
euk

Quality

67.5 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Orthoflavivirus› Quang_Binh_virus

TaxID: 643132

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 316-333_395-537
PDB
Domain cluster: rep: uncovered_polypeptide_truncated_polyprotein__YP_009333101_0-788__Cacipacore_virus__64305__D209-229_336-350_412-434_469-522_547-584
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.81 36.0 5.62e-01 82.6% 100.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.81 36.0 5.63e-01 82.6% 100.0%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.72 35.0 5.14e-01 82.6% 100.0%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 30.0 3.08e-01 100.0% 41.4%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 29.0 3.17e-01 100.0% 46.6%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 27.0 3.00e-01 100.0% 45.9%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 27.0 2.95e-01 100.0% 45.0%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 26.0 2.90e-01 100.0% 44.8%
6iw2A01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.62 36.0 3.98e-01 100.0% 69.2%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.62 19.0 2.77e-01 74.5% 54.5%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 26.0 2.93e-01 99.4% 47.2%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.61 23.0 3.33e-01 99.4% 72.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 27.0 2.92e-01 100.0% 46.6%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 25.0 2.73e-01 100.0% 45.4%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 22.0 3.04e-01 89.4% 68.4%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 25.0 2.76e-01 100.0% 47.1%
1dzkA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 28.0 2.90e-01 100.0% 49.3%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.50 26.0 3.31e-01 99.4% 82.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2330240 5090.1.1.1 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot 0.85 81.0 6.33e-01 100.0% 81.2%
4861488 5090.1.1.1 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot 0.82 77.0 6.16e-01 100.0% 83.4%
826 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.68 29.0 3.17e-01 100.0% 46.6%
4046583 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.64 27.0 3.03e-01 100.0% 47.7%
818 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 27.0 3.00e-01 100.0% 46.6%
820 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 27.0 2.95e-01 100.0% 45.0%
4195832 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.63 27.0 2.96e-01 100.0% 46.9%
4668044 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 28.0 3.02e-01 100.0% 47.4%
2552758 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.61 27.0 2.89e-01 100.0% 44.5%
3996508 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 27.0 2.81e-01 100.0% 41.2%
3487462 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 27.0 2.97e-01 100.0% 47.7%
4614038 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 26.0 2.86e-01 100.0% 45.1%
2103558 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 26.0 2.79e-01 100.0% 44.2%
3939474 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 26.0 2.79e-01 100.0% 42.1%
3567966 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.60 26.0 3.23e-01 100.0% 64.2%
3415072 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 26.0 2.76e-01 100.0% 43.6%
3215657 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 25.0 2.78e-01 100.0% 45.2%
3894563 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.59 25.0 2.82e-01 100.0% 46.9%
3631472 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.58 25.0 2.34e-01 100.0% 32.5%
3941288 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 27.0 2.91e-01 100.0% 49.0%
2438877 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 25.0 2.76e-01 100.0% 47.1%
4961667 5084.1.1.45 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF26421 0.55 29.0 3.35e-01 100.0% 69.6%
3520059 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 26.0 2.94e-01 99.4% 59.2%
D2 medium residues 122-213
PDB
Domain cluster: rep: uncovered_polypeptide_truncated_polyprotein__YP_009268598_0-711__Nakiwogo_virus__667516__D125-215
D3 medium residues 338-394
PDB
Domain cluster: rep: uncovered_polypeptide_truncated_polyprotein__YP_009259274_0-676__Mercadeo_virus__1708574__D309-361
D4 medium residues 538-626
PDB
Domain cluster: rep: envelope_protein__YP_009163750__Spanish_goat_encephalitis_virus__1691889__D312-394