←Back to structures

uncovered_polypeptide_truncated_polyprotein

Euk-Vir

Chaoyang_virus

uncovered_polypeptide_truncated_polyprotein__YP_009259651_0-1370__Chaoyang_virus__631267

Identity

Accession:: YP_009259651_0-1370 ↗
Protein ID:: uncovered_polypeptide_truncated_polyprotein
Kingdom:: euk

Quality

70.3 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Orthoflavivirus› Chaoyang_virus

TaxID: 631267

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 718-806

PDB

D2 high residues 1208-1332

PDB

Domain cluster: rep: NS2A__YP_009553730__Kampung_Karu_virus__2045186__D68-171

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01005.25 best	Flavi_NS2A	41.0	2.90e-10	64.8%	35.4%

D3 medium residues 224-296

PDB

D4 medium residues 297-340_427-484_574-694

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02832.23 best	Flavi_glycop_C	103.5	7.40e-30	43.0%	99.0%
PF00869.26	Flavi_glycoprot	43.6	3.20e-11	23.8%	14.3%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ok8A01	2.60.98.10	Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1	0.72	37.0	5.30e-01	79.4%	100.0%
1ti2B03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.67	24.0	3.98e-01	96.0%	86.9%
2jtdA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	31.0	3.97e-01	83.4%	91.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
297101	11.1.1.43 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Flavi_glycop_C	0.87	39.0	6.11e-01	73.1%	100.0%
1421	11.1.1.43 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Flavi_glycop_C	0.77	39.0	5.41e-01	84.8%	94.8%
4016209	11.1.1.105 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Coatamer_beta_C	0.52	32.0	3.93e-01	97.8%	95.7%

D5 medium residues 341-359_411-426_485-569

PDB

Domain cluster: rep: glycoprot__YP_009553727__Kampung_Karu_virus__2045186__D50-61_120-131_195-232_254-276

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00869.26 best	Flavi_glycoprot	72.9	3.80e-20	77.5%	27.7%

D6 medium residues 821-962

PDB

Domain cluster: rep: non-structural_protein_NS1__NP_775517__Powassan_virus__11083__D32-172

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00948.27 best	Flavi_NS1	172.7	1.50e-50	100.0%	40.8%

D7 medium residues 976-1139

PDB

Domain cluster: rep: NS1__YP_009389241__Karumba_virus__1969397__D203-357

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00948.27 best	Flavi_NS1	244.1	3.00e-72	100.0%	45.6%

D8 medium residues 1148-1207

PDB