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unknown_similar_to_AMEV019

Euk-Vir

Mythimna_separata_entomopoxvirus_L

unknown_similar_to_AMEV019__YP_008003802__Mythimna_separata_entomopoxvirus_L__1293572

Identity

Accession:
YP_008003802 ↗
Protein ID:
unknown_similar_to_AMEV019
Kingdom:
euk

Quality

85.2 mean pLDDT

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 449-527
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qkmB01 1.10.10.1050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dcp2, box A domain 0.74 65.0 6.01e-01 98.7% 87.3%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.68 43.0 5.05e-01 78.5% 94.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.66 59.0 4.87e-01 100.0% 62.2%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.66 51.0 4.57e-01 83.5% 88.2%
1xszA02 1.10.1000.11 Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 0.65 46.0 4.12e-01 74.7% 52.2%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.01e-01 84.8% 90.2%
2b1eA02 1.20.1310.30 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › 0.64 54.0 4.42e-01 94.9% 72.2%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.64 47.0 4.99e-01 77.2% 100.0%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.64 47.0 4.56e-01 81.0% 85.9%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.64 45.0 4.35e-01 77.2% 66.3%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.63 44.0 4.39e-01 78.5% 69.9%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.62 41.0 4.16e-01 72.2% 68.4%
1jt6A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 53.0 4.52e-01 100.0% 81.0%
7y3eA01 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.62 53.0 3.37e-01 97.5% 22.6%
1dj2A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.60 44.0 4.14e-01 78.5% 87.9%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.59 43.0 4.14e-01 77.2% 68.9%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.58 49.0 4.44e-01 97.5% 68.5%
1b25A02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.58 40.0 3.11e-01 72.2% 90.4%
1bgcA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.57 44.0 3.59e-01 84.8% 87.3%
3himA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 48.0 3.74e-01 100.0% 65.3%
3dd7C00 1.20.120.1870 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain 0.56 48.0 4.26e-01 100.0% 81.1%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.56 37.0 3.79e-01 70.9% 71.6%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.54 39.0 4.23e-01 93.7% 96.8%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.54 42.0 3.44e-01 84.8% 63.0%
2v40A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.54 42.0 4.09e-01 84.8% 88.6%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.53 43.0 3.76e-01 91.1% 89.5%
1euvA01 1.10.418.20 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › 0.53 37.0 3.39e-01 100.0% 55.2%
2j5vB01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.53 45.0 3.33e-01 100.0% 38.5%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.52 37.0 3.63e-01 75.9% 81.6%
5egwA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 39.0 2.55e-01 83.5% 60.6%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 35.0 3.53e-01 75.9% 83.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228465 604.4.1.0 ↗ alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.80 60.0 5.39e-01 78.5% 85.7%
4992091 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.76 54.0 3.23e-01 77.2% 12.0%
3297600 621.1.1.7 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › EMC6 0.74 55.0 5.11e-01 79.7% 80.0%
3590012 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.70 60.0 4.26e-01 100.0% 67.9%
4431924 6058.1.1.1 ↗ alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C 0.69 59.0 4.93e-01 100.0% 55.6%
3171699 101.1.1.133 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Vhr1 0.65 47.0 4.43e-01 78.5% 71.0%
5055279 1075.1.2.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.64 53.0 4.06e-01 96.2% 95.1%
3178349 310.2.1.35 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF28954 0.64 47.0 3.99e-01 78.5% 86.9%
4928737 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.62 44.0 4.20e-01 74.7% 80.0%
4426191 101.1.3.26 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › YcbB 0.62 44.0 3.60e-01 75.9% 78.1%
3732219 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.61 44.0 2.88e-01 77.2% 19.4%
4160987 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.61 51.0 4.58e-01 98.7% 67.3%
4068116 5060.1.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 0.59 46.0 4.12e-01 84.8% 86.1%
3239605 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 48.0 4.04e-01 89.9% 65.9%
3796461 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.57 40.0 4.13e-01 72.2% 85.3%
3691323 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 44.0 3.45e-01 83.5% 75.1%
3932090 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.57 39.0 3.96e-01 77.2% 72.5%
56928 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.54 40.0 3.60e-01 81.0% 76.5%
3454431 108.1.1.129 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF7874 0.52 45.0 4.36e-01 96.2% 93.3%
3230351 5057.1.1.1 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb 0.52 40.0 3.18e-01 81.0% 46.7%
3493379 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 3.67e-01 93.7% 57.5%
4071221 191.1.1.3 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_5 0.52 39.0 3.57e-01 86.1% 74.6%
5074271 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.51 43.0 3.12e-01 96.2% 83.8%
D2 medium residues 1-102_204-225
PDB
Domain cluster: rep: LR881104.1__CAD5236280.1__LLCLJKAH_00291__00291__D3-121_248-259
D3 medium residues 103-203
PDB
Domain cluster: rep: HE65__YP_003422402__Pseudalatia_unipuncta_granulovirus__36355__D144-219
D4 medium residues 281-317_329-357
PDB