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unknown_similar_to_AMEV109

Euk-Vir

Mythimna_separata_entomopoxvirus_L

unknown_similar_to_AMEV109__YP_008003662__Mythimna_separata_entomopoxvirus_L__1293572

Identity

Accession:: YP_008003662 ↗
Protein ID:: unknown_similar_to_AMEV109
Kingdom:: euk

Quality

87.2 mean pLDDT

Cluster

View cluster (22 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-104

PDB

Domain cluster: rep: ORF056__YP_009121841__Spodoptera_frugiperda_granulovirus__307454__D22-94

D2 high residues 112-194

PDB

Domain cluster: rep: unknown_similar_to_AMEV109__YP_008003671__Mythimna_separata_entomopoxvirus_L__1293572__D112-193

D3 medium residues 198-257

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3broD00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	46.0	3.67e-01	100.0%	94.8%
1yewB00	1.20.1450.10	Mainly Alpha › Up-down Bundle › particulate methane monooxygenase, chain B › Ammonia/particulate methane monooxygenase, subunit A	0.54	45.0	3.13e-01	100.0%	26.1%
5trdA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	40.0	3.75e-01	86.7%	100.0%
2l02A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	35.0	3.18e-01	90.0%	50.0%
3fxqB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	37.0	3.34e-01	76.7%	98.9%
2hf6A00	3.30.450.60	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.52	40.0	3.02e-01	90.0%	33.6%
2riqA02	2.20.25.630	Mainly Beta › Single Sheet › N-terminal domain of TfIIb ›	0.51	37.0	3.72e-01	80.0%	86.7%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3376685	3164.1.1.3 ↗	few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › DYW_deaminase	0.66	33.0	3.85e-01	100.0%	67.5%
3839291	300.1.1.8 ↗	a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2	0.63	43.0	2.83e-01	70.0%	17.6%
4978506	3714.1.1.0 ↗	a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain	0.62	51.0	3.73e-01	100.0%	75.3%
4976626	3714.1.1.0 ↗	a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain	0.61	53.0	3.59e-01	100.0%	34.7%
4952130	3714.1.1.1 ↗	a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical	0.60	51.0	3.50e-01	100.0%	35.2%
4999554	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	31.0	2.67e-01	88.3%	33.3%
3711450	101.1.15.0 ↗	alpha arrays › HTH › HTH › HAT1, C-terminal domain	0.56	33.0	3.02e-01	96.7%	43.8%
3895743	3615.1.1.7 ↗	alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20	0.54	45.0	3.31e-01	100.0%	86.3%
4018012	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.54	45.0	2.72e-01	100.0%	28.7%
3406946	229.1.1.0 ↗	a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like	0.53	33.0	2.83e-01	85.0%	38.0%
3566423	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.53	44.0	3.11e-01	100.0%	72.6%
3259016	1017.1.1.1 ↗	a+b two layers › Rrs1 › Rrs1 › Rrs1 › RRS1	0.52	33.0	2.99e-01	78.3%	47.5%
4949022	2003.1.2.7 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2	0.51	37.0	2.32e-01	81.7%	13.5%

D4 medium residues 258-327_381-442

PDB

Domain cluster: rep: hypothetical_protein_PsunGV_gp021__YP_003422360__Pseudalatia_unipuncta_granulovirus__36355__D294-329_399-485

D5 medium residues 328-380_443-461

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13930.13 best	Endonuclea_NS_2	29.8	8.60e-07	90.3%	34.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2qgpA00	1.10.30.50	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A ›	0.57	47.0	4.51e-01	88.9%	77.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4030765	378.1.1.11 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2	0.76	60.0	4.49e-01	84.7%	56.9%
4839749	3821.1.1.0 ↗	a+b complex topology › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain › CRISPR-associated endonuclease Cas9 beta-hairpin domain	0.74	43.0	5.29e-01	76.4%	93.3%
2550470	378.1.1.10 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4	0.65	50.0	3.83e-01	83.3%	47.0%
4951302	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.65	44.0	4.60e-01	70.8%	92.3%
3952776	377.1.1.88 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH	0.64	44.0	4.60e-01	80.6%	78.5%
185780	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.61	48.0	4.37e-01	84.7%	66.0%
3587782	378.1.1.0 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases	0.60	46.0	3.96e-01	81.9%	70.0%
4941657	377.1.1.88 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH	0.57	47.0	4.68e-01	91.7%	86.7%
5070853	378.1.1.2 ↗	few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH	0.57	47.0	4.47e-01	91.7%	76.5%