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unknown_similar_to_AMEV109

Euk-Vir

Choristoneura_biennis_entomopoxvirus

unknown_similar_to_AMEV109__YP_008004201__Choristoneura_biennis_entomopoxvirus__10288

Identity

Accession:
YP_008004201 ↗
Protein ID:
unknown_similar_to_AMEV109
Kingdom:
euk

Quality

86.0 mean pLDDT

Cluster

View cluster (22 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-106
PDB
Domain cluster: rep: ORF056__YP_009121841__Spodoptera_frugiperda_granulovirus__307454__D22-94
D2 high residues 114-197
PDB
Domain cluster: rep: unknown_similar_to_AMEV109__YP_008003671__Mythimna_separata_entomopoxvirus_L__1293572__D112-193
D3 medium residues 201-259_309-386_430-460
PDB
Domain cluster: rep: unknown_similar_to_AMEV109__YP_008004549__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D199-257_323-377_435-459
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13930.13 best Endonuclea_NS_2 30.5 5.40e-07 54.8% 37.9%
D4 medium residues 260-308_387-429
PDB
Domain cluster: rep: hypothetical_protein_PsunGV_gp021__YP_003422360__Pseudalatia_unipuncta_granulovirus__36355__D294-329_399-485
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.65 50.0 4.54e-01 100.0% 61.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.63 43.0 3.68e-01 100.0% 42.2%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.63 51.0 4.55e-01 100.0% 62.0%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.61 54.0 4.78e-01 100.0% 68.7%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 34.0 3.23e-01 79.3% 45.9%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.58 38.0 3.11e-01 81.5% 34.7%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.58 43.0 3.98e-01 100.0% 59.8%
4dooA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.57 33.0 2.87e-01 90.2% 33.6%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.47e-01 79.3% 47.9%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.56 41.0 3.44e-01 84.8% 45.2%
1kiaA01 3.30.46.10 Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 0.55 38.0 4.00e-01 87.0% 80.7%
5ds1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 34.0 3.50e-01 89.1% 64.1%
1r4sA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.53 49.0 3.39e-01 100.0% 62.2%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.53 49.0 3.48e-01 100.0% 88.8%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.53 48.0 3.35e-01 100.0% 88.2%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.53 39.0 3.24e-01 78.3% 57.5%
3ddvB01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.53 41.0 3.52e-01 81.5% 96.4%
7xgtA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 44.0 3.23e-01 94.6% 62.1%
2ikkA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.52 40.0 3.43e-01 81.5% 91.1%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.51 45.0 3.30e-01 100.0% 36.4%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.51 41.0 3.49e-01 84.8% 56.8%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 44.0 3.80e-01 100.0% 65.8%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.50 40.0 3.34e-01 88.0% 50.3%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.50 43.0 3.08e-01 95.7% 43.1%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.50 43.0 3.69e-01 95.7% 68.0%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2841854 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.64 58.0 5.08e-01 100.0% 68.9%
3581780 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.63 40.0 3.44e-01 84.8% 40.7%
169039 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.61 54.0 4.78e-01 100.0% 68.7%
2658868 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.60 54.0 4.79e-01 100.0% 72.4%
2769360 719.1.1.4 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › SAS-6_N 0.59 40.0 4.34e-01 78.3% 83.1%
6518 265.1.1.1 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.57 51.0 4.53e-01 100.0% 69.0%
5036533 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.57 43.0 3.33e-01 91.3% 33.3%
5054315 868.1.1.0 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.56 41.0 3.20e-01 82.6% 36.3%
2319348 327.16.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.56 45.0 3.19e-01 94.6% 27.2%
3643035 193.1.1.0 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like 0.56 39.0 2.85e-01 84.8% 25.8%
3519825 11.1.1.851 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26192 0.56 44.0 3.44e-01 84.8% 60.8%
3723082 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 48.0 3.41e-01 95.7% 50.7%
4858211 327.16.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.55 44.0 3.77e-01 94.6% 51.9%
4973090 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.55 41.0 4.06e-01 84.8% 74.0%
3455522 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 45.0 3.16e-01 93.5% 88.7%
3324457 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.07e-01 100.0% 55.7%
3607231 7504.1.1.3 ↗ a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf 0.55 47.0 3.58e-01 100.0% 84.0%
3309384 9.13.1.1 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent 0.55 42.0 3.93e-01 100.0% 65.5%
4009646 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.54 48.0 3.37e-01 97.8% 42.4%
4966376 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.54 37.0 2.52e-01 70.7% 22.4%
3869953 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 3.14e-01 100.0% 32.2%
4025179 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 47.0 3.69e-01 100.0% 47.8%
3326287 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.54 41.0 3.81e-01 83.7% 73.3%
4278326 7503.1.1.0 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.53 39.0 3.46e-01 83.7% 52.6%
1556923 230.1.1.1 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase 0.53 42.0 3.51e-01 85.9% 88.3%
4663376 3593.1.1.1 ↗ a+b complex topology › Oncogenic effector CagA meander beta sheet domain › Oncogenic effector CagA meander beta sheet domain › Oncogenic effector CagA meander beta sheet domain › CagA_N 0.53 47.0 3.12e-01 100.0% 32.8%
3569201 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 45.0 3.09e-01 100.0% 32.6%
3886322 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 45.0 3.06e-01 100.0% 32.2%
4023252 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 36.0 3.19e-01 82.6% 50.0%
3272034 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 40.0 2.76e-01 84.8% 59.2%
3400385 883.1.1.3 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › JHBP 0.51 46.0 3.47e-01 100.0% 79.1%
3416305 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 41.0 2.75e-01 88.0% 29.9%
3937222 243.1.1.50 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind 0.51 45.0 3.59e-01 100.0% 80.0%
3608538 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 39.0 3.07e-01 81.5% 42.1%
3839285 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.50 45.0 3.61e-01 100.0% 62.7%
3391986 883.1.1.3 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › JHBP 0.50 46.0 3.40e-01 100.0% 77.4%